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flowsom
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multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore
flowsom
7.7 years ago
jeremyeadler
• 0
1
vote
3
replies
553
views
FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 5 months ago by
SamGG
▴ 350 • written 5 months ago by
agus_rizzo
• 0
0
votes
2
replies
304
views
FlowSOM error system.file()
FlowSOM
updated 5 months ago by
SamGG
▴ 350 • written 5 months ago by
agus_rizzo
• 0
0
votes
0
replies
1.4k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
3.6 years ago
domenico.somma
• 0
1
vote
6
replies
1.6k
views
Running FlowSOM in R problem
FlowSOM
updated 3.5 years ago by
sofie.vangassen
▴ 10 • written 3.5 years ago by
Václav
• 0
0
votes
0
replies
917
views
Help with FlowSOM
FlowSOM
2.9 years ago
ismail.ameran
• 0
0
votes
0
replies
786
views
Job:
Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace
CytoGLMM
FlowSOM
2.4 years ago
hbolouri
• 0
1
vote
1
reply
486
views
FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 13 months ago by
helucro
▴ 70 • written 13 months ago by
Anirban
• 0
0
votes
0
replies
251
views
Identifying populations within a FlowSOM tree
FlowSOM
5 months ago
agus_rizzo
• 0
0
votes
2
replies
873
views
FlowSOM dependencies - cytoML and flowutils
FlowSOM
2.6 years ago
jakub.savara
• 0
0
votes
0
replies
1.5k
views
FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom
consensusclusterplus
7.1 years ago
Lukas Weber
• 0
0
votes
1
reply
1.1k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.1 years ago
fabrizio.benedetti.82
• 0
12 results • Page
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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