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Showing :
flowcore
•
reset
0
votes
0
replies
140
views
Error in the use of flowTrans: L-BFGS-B needs finite values of 'fn'
flowCore
FlowCytometryData
flowTrans
flow
4 months ago
hamiltond
▴ 10
0
votes
0
replies
223
views
FIXED: Using read.flowSet, getting a "no matching files found" error
flowCore
FlowCytometryData
4 months ago
hamiltond
▴ 10
0
votes
0
replies
135
views
Does flowCore::spillover() produce a spillover matrix or a compensation matrix?
flowCore
4 months ago
nmchavez
• 0
0
votes
0
replies
116
views
flowDensity Unable to find inherited method when given a flowFrame Object
flowCore
flowDensity
4 months ago
nmchavez
• 0
0
votes
0
replies
144
views
Reducing/sampling number of FCS events
FlowCytometry
flowCore
7 months ago
markkelly1983
• 0
0
votes
1
reply
295
views
Difference in output of logicle transform in different languages
flowCore
updated 4 months ago by
Eduardo
• 0 • written 8 months ago by
markkelly1983
• 0
0
votes
0
replies
202
views
Job:
Bioconductor developer
FlowCytometry
flowCore
8 months ago
markkelly1983
• 0
0
votes
1
reply
240
views
Error in flowCore::read.FCS(): Error in uint2double(splitted, endian == "big") : vector
read.FCS
flowCore
9 months ago
Rainer
• 0
0
votes
1
reply
327
views
Undefined columns error R cytometry analysis
flowCore
ggcyto
FlowCytometryData
updated 11 months ago by
Jiang, Mike
★ 1.3k • written 15 months ago by
Elizabeth
• 0
0
votes
1
reply
579
views
how to get MFI stats from data
flowCore
flowStats
flowUtils
flowWorkspace
updated 11 months ago by
Jiang, Mike
★ 1.3k • written 15 months ago by
Khai-Chuong
• 0
0
votes
1
reply
434
views
Re-naming $PnS parameters
flowCore
updated 17 months ago by
SamGG
▴ 270 • written 17 months ago by
jasonemo
• 0
2
votes
3
replies
436
views
Getting number of datasets with flowCore
flowCore
updated 17 months ago by
SamGG
▴ 270 • written 17 months ago by
mark.holmes
▴ 10
1
vote
1
reply
450
views
Error when using read.FCS
compensation
flowCore
FlowCore
read.FCS
updated 18 months ago by
SamGG
▴ 270 • written 18 months ago by
Pepijn
• 0
0
votes
0
replies
263
views
flowCore - linear transformation
cytofWorkflow
cytofworkflow
flowCore
21 months ago
GFM
▴ 20
1
vote
6
replies
640
views
read.flowSet() raises " Argument 'phenoData' must be of type 'AnnotatedDataFrame'" error
flowCore
updated 21 months ago by
SamGG
▴ 270 • written 21 months ago by
Rainer
• 0
0
votes
7
replies
764
views
flowset/ncdfFlowset replace keywords doesn't work right
ncdfFlow
flowCore
updated 22 months ago by
Jiang, Mike
★ 1.3k • written 22 months ago by
anders.tondell
▴ 30
3
votes
10
replies
1.0k
views
Reading multiple data segments from FCS 3.0 file
flowCore
flow cytometry
FCS 3.0
ncdfFlowSet
updated 12 weeks ago by
SamGG
▴ 270 • written 2.3 years ago by
alavy
▴ 30
0
votes
1
reply
278
views
FlowCore openCyto: problem with summary(result)
flowCore
openCyto
Summary
Result
Filter
updated 2.3 years ago by
Jake Wagner
▴ 300 • written 2.4 years ago by
noviello
• 0
2
votes
2
replies
572
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow
flowCore
ncdfFlowSet
read.FCS
updated 2.3 years ago by
Jake Wagner
▴ 300 • written 2.3 years ago by
alavy
▴ 30
4
votes
5
replies
495
views
Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace
flowCore
openCyto
flowFrame
F-measure
updated 2.4 years ago by
Jake Wagner
▴ 300 • written 2.4 years ago by
stefankolling+github
• 0
0
votes
0
replies
210
views
Strange problem with parameter range when creating a flowFPModel
flowCore
flowFP
flowFPModel
2.5 years ago
palffy.karoly
• 0
0
votes
2
replies
316
views
flowCore not displaying FL gates
flowCore
updated 2.6 years ago by
Jiang, Mike
★ 1.3k • written 2.6 years ago by
rleenay
• 0
2
votes
4
replies
495
views
Mathematical operations in FCS file
flowCore
flow cytometry
2.7 years ago
chandra.swarnendu
• 0
0
votes
1
reply
775
views
Reproducing FlowJo Biexponential Transform in flowCore
flowCore
updated 2.8 years ago by
Jiang, Mike
★ 1.3k • written 2.8 years ago by
gene_bioconductor
▴ 10
1
vote
3
replies
618
views
flowcore:::read.FCS does not read FCS3.1 correctly
flowcore
2.9 years ago
cahyasu88
• 0
1
vote
0
replies
419
views
Cell cycle analysis subG1
flowploidy
apoptosis
cell cycle
flowCore
3.0 years ago
nina.hahn
• 0
3
votes
2
replies
476
views
flowWorkspace cannot load external data
flowWorkspace
external data
flowCore
3.0 years ago
Brent.OCarrigan
• 0
1
vote
2
replies
775
views
flowCore issue: creating and applying new compensation matrix
compensate()
flowCore
3.1 years ago
rdlr
• 0
0
votes
1
reply
388
views
Issue creating transformed filter in flowCore
flowCore
updated 3.1 years ago by
Jake Wagner
▴ 300 • written 3.1 years ago by
npb27
• 0
4
votes
4
replies
703
views
FCSTransTransform() implementation in flowCore
flowCore
FCSTrans
flow cytometry
updated 3.2 years ago by
Jake Wagner
▴ 300 • written 3.2 years ago by
Nik Tuzov
▴ 70
2
votes
1
reply
1.1k
views
Convert Flowframe to matrix
flowcore
fcs
flow cytommetry
matrix
conversion
updated 3.2 years ago by
Jake Wagner
▴ 300 • written 3.2 years ago by
apurva
• 0
2
votes
3
replies
833
views
how to use the flowCore spillover function
flowCore
spillover
gatingset2FlowJO
updated 3.2 years ago by
Jake Wagner
▴ 300 • written 3.2 years ago by
k.teijgeler
• 0
1
vote
4
replies
703
views
flowCore install missing a dependency?
flowCore
Installation
dependency
updated 3.2 years ago by
Jake Wagner
▴ 300 • written 3.2 years ago by
Robert Baer
▴ 70
0
votes
0
replies
369
views
flowPloidy: how to visualize data on logarythmic x axis
flowPloidy
flowcore
flow cytometry
3.4 years ago
kovacik
• 0
1
vote
5
replies
840
views
Flow cytometry optimization of transformation parameters
flow Cytometry
flowCore
flowTrans
3.4 years ago
carlos.x.martinez-fleites
• 0
1
vote
2
replies
527
views
gatingML examples needed
flowCore
flowUtils
gatingML
updated 3.4 years ago by
Jiang, Mike
★ 1.3k • written 3.4 years ago by
Andrew Box
▴ 10
1
vote
6
replies
1.3k
views
flowCore: uneven number of tokens / The last keyword is dropped.
flowCore
updated 3.4 years ago by
SamGG
▴ 270 • written 3.4 years ago by
OT
• 0
2
votes
5
replies
698
views
flowCore filterSummary toTable() function not working
flowCore
flowcore
flow cytometry
updated 3.5 years ago by
Jake Wagner
▴ 300 • written 3.5 years ago by
mahlon
• 0
0
votes
1
reply
518
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
3.5 years ago
j.krop
• 0
1
vote
1
reply
828
views
read.FCS memory limit? - $PnRNAis larger than R's numeric limit
flowCore
read.FCS
memory_limit
3.6 years ago
lloyd.izard
▴ 80
0
votes
1
reply
666
views
flowDensity loop on flowSet
flowdensity
flowcore
for loop
updated 3.6 years ago by
Bioconductor Community
0 • written 3.8 years ago by
beshea.jj
• 0
0
votes
2
replies
609
views
flowCore: retain raw data in the flowset after transformation
flow cytometry
flowcore
updated 3.6 years ago by
Jiang, Mike
★ 1.3k • written 3.6 years ago by
carlos.x.martinez-fleites
• 0
3
votes
3
replies
1.1k
views
Opencyto - detector name not found in flow data, but pretty sure it's there
opencyto
flowcore
flow cytometry
updated 3.9 years ago by
Jiang, Mike
★ 1.3k • written 4.8 years ago by
Andrew Box
▴ 10
1
vote
2
replies
582
views
Newbie question: how do I address a subset obtained by split()?
flowStats
newbie
split
subset
flowCore
3.9 years ago
yulia.chupalova
• 0
3
votes
3
replies
2.2k
views
Modifying or writing a FCS file in R using the FlowCore package
FCS
flowframe
flowcore
flow cytometry
3.9 years ago
vonskopnik
▴ 10
1
vote
6
replies
762
views
Cannot install flowViz package because dependency flowCore cannot be found, however flowCore has just been installed.
flowViz
flowCore
package installation
updated 3.9 years ago by
Martin Morgan
25k • written 4.0 years ago by
ghn876
▴ 10
0
votes
1
reply
554
views
How do I apply a singleParameterTransform to a number of parameters in a flowFrame like the standard transforms?
flowcore
flow cytometry
flowdensity
hyperlog
transformation
updated 4.0 years ago by
Jiang, Mike
★ 1.3k • written 4.0 years ago by
Joseph.Hanson
• 0
0
votes
2
replies
556
views
Loading Flow Files
flowcore
list.files
4.0 years ago
nicolette.sipperly
• 0
0
votes
1
reply
457
views
flowCore parameters( ) function does not appear to exist
flowcore
4.1 years ago
neilruthen
• 0
1
vote
3
replies
3.3k
views
Load FlowCore to read .fcs files in R
flowcore
flow cytometry
R
4.1 years ago
Bayram Sarilmaz
• 0
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