Showing : flowcore • reset
0
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0
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79
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how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
6 weeks ago Khai-Chuong • 0
0
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0
replies
59
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Undefined columns error R cytometry analysis
flowCore ggcyto FlowCytometryData
7 weeks ago Elizabeth • 0
0
votes
1
reply
98
views
Re-naming $PnS parameters
flowCore
updated 3 months ago by ▴ 270 • written 3 months ago by • 0
1
vote
3
replies
155
views
Getting number of datasets with flowCore
flowCore
updated 3 months ago by ▴ 270 • written 3 months ago by • 0
1
vote
1
reply
113
views
Error when using read.FCS
compensation flowCore FlowCore read.FCS
updated 4 months ago by ▴ 270 • written 4 months ago by • 0
0
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0
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86
views
flowCore - linear transformation
cytofWorkflow cytofworkflow flowCore
7 months ago GFM ▴ 20
1
vote
6
replies
267
views
read.flowSet() raises " Argument 'phenoData' must be of type 'AnnotatedDataFrame'" error
flowCore
updated 7 months ago by ▴ 270 • written 7 months ago by • 0
0
votes
7
replies
412
views
flowset/ncdfFlowset replace keywords doesn't work right
ncdfFlow flowCore
updated 7 months ago by ★ 1.3k • written 8 months ago by ▴ 30
4
votes
8
replies
351
views
Reading multiple data segments from FCS 3.0 file
flowCore flow cytometry FCS 3.0 ncdfFlowSet
updated 2 days ago by • 0 • written 13 months ago by ▴ 20
0
votes
1
reply
114
views
FlowCore openCyto: problem with summary(result)
flowCore openCyto Summary Result Filter
updated 13 months ago by ▴ 280 • written 14 months ago by • 0
2
votes
2
replies
224
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow flowCore ncdfFlowSet read.FCS
updated 13 months ago by ▴ 280 • written 13 months ago by ▴ 20
4
votes
5
replies
233
views
Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 14 months ago by ▴ 280 • written 14 months ago by • 0
0
votes
0
replies
84
views
Strange problem with parameter range when creating a flowFPModel
flowCore flowFP flowFPModel
15 months ago palffy.karoly • 0
0
votes
2
replies
118
views
flowCore not displaying FL gates
flowCore
updated 17 months ago by ★ 1.3k • written 17 months ago by • 0
2
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4
replies
226
views
Mathematical operations in FCS file
flowCore flow cytometry
18 months ago chandra.swarnendu • 0
0
votes
1
reply
262
views
Reproducing FlowJo Biexponential Transform in flowCore
flowCore
updated 19 months ago by ★ 1.3k • written 19 months ago by ▴ 10
1
vote
3
replies
234
views
flowcore:::read.FCS does not read FCS3.1 correctly
flowcore
21 months ago cahyasu88 • 0
1
vote
0
replies
256
views
Cell cycle analysis subG1
flowploidy apoptosis cell cycle flowCore
22 months ago nina.hahn • 0
3
votes
2
replies
252
views
flowWorkspace cannot load external data
flowWorkspace external data flowCore
22 months ago Brent.OCarrigan • 0
1
vote
2
replies
327
views
flowCore issue: creating and applying new compensation matrix
compensate() flowCore
23 months ago rdlr • 0
0
votes
1
reply
211
views
Issue creating transformed filter in flowCore
flowCore
updated 23 months ago by ▴ 280 • written 23 months ago by • 0
4
votes
4
replies
367
views
FCSTransTransform() implementation in flowCore
flowCore FCSTrans flow cytometry
updated 2.0 years ago by ▴ 280 • written 2.0 years ago by ▴ 70
2
votes
1
reply
520
views
Convert Flowframe to matrix
flowcore fcs flow cytommetry matrix conversion
updated 2.0 years ago by ▴ 280 • written 2.0 years ago by • 0
2
votes
3
replies
396
views
how to use the flowCore spillover function
flowCore spillover gatingset2FlowJO
updated 2.0 years ago by ▴ 280 • written 2.0 years ago by • 0
1
vote
4
replies
376
views
flowCore install missing a dependency?
flowCore Installation dependency
updated 2.1 years ago by ▴ 280 • written 2.1 years ago by ▴ 70
0
votes
0
replies
194
views
flowPloidy: how to visualize data on logarythmic x axis
flowPloidy flowcore flow cytometry
2.2 years ago kovacik • 0
1
vote
5
replies
463
views
Flow cytometry optimization of transformation parameters
flow Cytometry flowCore flowTrans
2.3 years ago carlos.x.martinez-fleites • 0
1
vote
2
replies
322
views
gatingML examples needed
flowCore flowUtils gatingML
updated 2.3 years ago by ★ 1.3k • written 2.3 years ago by ▴ 10
1
vote
6
replies
829
views
flowCore: uneven number of tokens / The last keyword is dropped.
flowCore
updated 2.3 years ago by ▴ 270 • written 2.3 years ago by • 0
2
votes
5
replies
428
views
flowCore filterSummary toTable() function not working
flowCore flowcore flow cytometry
updated 2.3 years ago by ▴ 280 • written 2.3 years ago by • 0
0
votes
1
reply
345
views
Error after assignPrelim(), CyTOF compenstation
CATALYST flowCore assignPrelim Error in vapply read.FCS
2.4 years ago j.krop • 0
1
vote
1
reply
555
views
read.FCS memory limit? - $PnRNAis larger than R's numeric limit
flowCore read.FCS memory_limit
2.4 years ago lloyd.izard ▴ 80
0
votes
1
reply
439
views
flowDensity loop on flowSet
flowdensity flowcore for loop
updated 2.4 years ago by 0 • written 2.6 years ago by • 0
0
votes
2
replies
404
views
flowCore: retain raw data in the flowset after transformation
flow cytometry flowcore
updated 2.4 years ago by ★ 1.3k • written 2.4 years ago by • 0
3
votes
3
replies
769
views
Opencyto - detector name not found in flow data, but pretty sure it's there
opencyto flowcore flow cytometry
updated 2.7 years ago by ★ 1.3k • written 3.7 years ago by ▴ 10
1
vote
2
replies
395
views
Newbie question: how do I address a subset obtained by split()?
flowStats newbie split subset flowCore
2.8 years ago yulia.chupalova • 0
3
votes
3
replies
1.5k
views
Modifying or writing a FCS file in R using the FlowCore package
FCS flowframe flowcore flow cytometry
2.8 years ago vonskopnik ▴ 10
1
vote
6
replies
542
views
Cannot install flowViz package because dependency flowCore cannot be found, however flowCore has just been installed.
flowViz flowCore package installation
updated 2.8 years ago by 25k • written 2.8 years ago by ▴ 10
0
votes
1
reply
347
views
How do I apply a singleParameterTransform to a number of parameters in a flowFrame like the standard transforms?
flowcore flow cytometry flowdensity hyperlog transformation
updated 2.8 years ago by ★ 1.3k • written 2.8 years ago by • 0
0
votes
2
replies
353
views
Loading Flow Files
flowcore list.files
2.9 years ago nicolette.sipperly • 0
0
votes
1
reply
278
views
flowCore parameters( ) function does not appear to exist
flowcore
2.9 years ago neilruthen • 0
1
vote
3
replies
2.3k
views
Load FlowCore to read .fcs files in R
flowcore flow cytometry R
3.0 years ago Bayram Sarilmaz • 0
0
votes
2
replies
626
views
Beginner & HowTo-flowCore-Example
flowcore
updated 3.1 years ago by 57k • written 3.1 years ago by • 0
2
votes
5
replies
729
views
How to identify multiple datasets in FCS file through flowCore
flowcore flow cytometry dataset
3.1 years ago vinko.tosevski • 0
2
votes
4
replies
554
views
trouble showing a polygon gate using geom_gate
flowcore ggcyto
updated 3.2 years ago by ★ 1.3k • written 3.2 years ago by ▴ 10
0
votes
3
replies
720
views
Spillover matrix in FlowCore doesn't match Compensation Matrix from FlowJo
spillover flowcore compensation matrix bioconductor flow cytometry
3.3 years ago Samuel Ahuno • 0
2
votes
4
replies
1.2k
views
Exporting FCS from FlowJo for flowCore & cytofkit analysis
flowcore flow cytometry cytofkit
updated 3.3 years ago by ▴ 270 • written 3.3 years ago by ▴ 10
1
vote
2
replies
450
views
How do you re-order .fcs files in a flowSet?
flowcore flowset bioconductor flow cytometry fcs file
3.3 years ago Samuel Ahuno • 0
0
votes
6
replies
1.2k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 3.3 years ago by • 0 • written 5.3 years ago by • 0
0
votes
1
reply
469
views
spillover::flowCore problem: Error: Unable to match stains with controls based on intensity: a single stain matches to several multiple controls.
flowCore spillover compensation matrix bioconductor flow cytometry
3.4 years ago Samuel Ahuno • 0
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