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fluidigm
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Combine scRNAseq data for bulk analysis using DESeq2
DESeq2
scRNAseq
Fluidigm
19 months ago • updated 18 months ago
evocanres
• 0
0
votes
1
reply
1.2k
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Fluidigm data analysis - how to get adj p-values for 96 genes
fluidigm
wilcoxon signed rank test
t.test
adj.p.value
normal distribution
updated 8.1 years ago by
Gordon Smyth
50k • written 8.1 years ago by
dk364
• 0
0
votes
1
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1.0k
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Normalization and batch effect adjustment of fluidgm pcr data to be analyzed with Limma
fluidigm
normalization
limma
pcr
updated 7.3 years ago by
Gordon Smyth
50k • written 7.3 years ago by
raf4
▴ 20
0
votes
1
reply
528
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Limma for Fluidigm high throughput PCR
limma
Limma
Fluidigm
updated 13 months ago by
Gordon Smyth
50k • written 13 months ago by
jms2520
▴ 10
0
votes
0
replies
820
views
HTqPCR for Fluidigm Results
htqpcr
fluidigm
6.2 years ago
rhonce
• 0
0
votes
0
replies
916
views
Import problem with HTqPCR Fluidigm 96.96
htqpcr
bioconductor
fluidigm
biomark
6.2 years ago
reed27
• 0
6 results • Page
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Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
Comment: Too many significant genes when integrating gtex and tcga
by
ATpoint
★ 4.1k
These two datasets are from completely different experiments / batches. It is utterly meaningless to compare them. I would suggest comparat…
Votes
package goseq seems to be not available on the latest version of R
package goseq seems to be not available on the latest version of R
Print Differentially Expressed Exons From Dexseq Results
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
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