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t.test
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2
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6
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864
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How to make boxplot with pairwise and overall p value from Limma
t.test
boxplot
limma
anova
3 months ago
Chris
▴ 20
2
votes
1
reply
724
views
Which test fits the best here
fisher
wilcox
t.test
3.9 years ago
AZ
▴ 30
0
votes
1
reply
1.3k
views
Fluidigm data analysis - how to get adj p-values for 96 genes
fluidigm
wilcoxon signed rank test
t.test
adj.p.value
normal distribution
updated 8.3 years ago by
Gordon Smyth
51k • written 8.3 years ago by
dk364
• 0
2
votes
5
replies
3.9k
views
How to use t.test to select best features out of multiple features?
microarray
biobase
feature selection
t.test
R
updated 8.9 years ago by
svlachavas
▴ 830 • written 8.9 years ago by
babumanish837
▴ 10
2
votes
4
replies
6.3k
views
T-test for microarray data
limma
microarray
t.test
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
eslamias
• 0
6
votes
10
replies
4.9k
views
defining a function for multiple paired t.test in many rows of a microarray dataset
microarray
r
t.test
bioconductor
updated 9.5 years ago by
Gordon Smyth
51k • written 9.5 years ago by
svlachavas
▴ 830
6 results • Page
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Answer: Validity of SingleR with very small bulk RNAseq reference
by
ATpoint
★ 4.2k
The vignette data are "large" because it is single-cell data and each cell is considered in this case a "replicate". With bulk RNA-seq you …
Answer: Plot PCA with ellipses using ggplot
by
ATpoint
★ 4.2k
This is rather a ggplot than DESeq2 question, please see for example https://stackoverflow.com/questions/49931681/error-too-few-points-to-c…
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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