Bioconductor Geneoverlap

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GeneOverlap heatmaps

10 months ago Johanna • 0

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GeneOverlap multiple figures heatmap

updated 5.2 years ago by James W. MacDonald 68k • written 5.2 years ago by C T ▴ 140

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genomicranges geneoverlap findoverlaps

updated 9.1 years ago by Michael Lawrence ★ 11k • written 9.1 years ago by yao.h.1988 • 0

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GeneOverlap DEGgenes affymetrixchip bioconductor

10.1 years ago svlachavas ▴ 840

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Comment: Unable to install a forged BSgenome package by James W. MacDonald 68k

R doesn't like the name of your package. I would bet that it's the minus sign, so maybe remove that from the name of the package and from t…

Comment: Unable to install a forged BSgenome package by JABEZ RAJU • 0

install.packages("E:/PhD data/RNAseq/TSS/BSgenome.Hnudivirus-2.NCBI.ViralProj14215", repos = NULL, type = "source") Installing package into…

Comment: DESeq2 with proteomics data by wook2014 • 0

You may need to do NA imputation before give the data to DEseq2 and there are study on DEseq2 performance on proteomics data, like :https:/…

Answer: Unable to install a forged BSgenome package by James W. MacDonald 68k

Add a repos = NULL to `install.packages`. You may also need to either move the file to a dir that doesn't have a space in the name or you […

Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by James W. MacDonald 68k

Have you figured out how to do this using tidy grammar? Using non-tidy grammar is quite simple, and perhaps you already know how to do that…

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Answer: Unable to install a forged BSgenome package

Answer: How to combine two DESeq2 objects (dds) for analysis

How to combine two DESeq2 objects (dds) for analysis

How can I correctly use phyloseq with Docker?

A: DESeq2::sizeFactors() function does not output the sizeFactor table.

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