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genetclassifier
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2.0k
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Package "geNetClassifier": is this an "igraph' error?
software error
geNet
igraph
genetclassifier
updated 8.8 years ago by
saibar
▴ 20 • written 8.8 years ago by
alakatos
▴ 130
0
votes
4
replies
1.5k
views
Changing SVM-Kernal in geNetClassifier function
genet
genetclassifier
6.5 years ago • updated 6.4 years ago
Seymoo
• 0
0
votes
2
replies
1.8k
views
DESEq2 erroe
hguatlas13k
geNetClassifier
ClusterJudge
epigraHMM
2.1 years ago
Muhammad
• 0
0
votes
0
replies
1.3k
views
geNetClassifier Error in (function (cl, name, valueClass)
software error
geNetClassifier
7.6 years ago
polemiraza
▴ 70
0
votes
0
replies
529
views
Using geNetClassifier with RNA seq data
geNetClassifier
Normalization
2.1 years ago
nhaus
▴ 30
5 results • Page
1 of 1
Recent ...
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Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…
Comment: Differences in differential analysis methods for RNA-Seq
by
james.zhang20
• 0
Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…
Comment: Deseq2 and Normalization of RNA sequencing data
by
ATpoint
★ 4.1k
There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
• 0
Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…
Votes
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
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