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Job:
Post-Doc: Development of a new method to study the distribution of the effect sizes of QTL
StatisticalMethod
Evolution
QuantitativeTrailLocus
Genetics
JobPosting
8 days ago
pierre.devillemereuil
• 0
0
votes
0
replies
265
views
accesing gene name RNAseq
genetics
GeneticsPed
Genetics
6 months ago
Gülsüm
• 0
0
votes
0
replies
388
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Job:
Bioinformatics Research Associate, Genomics and Genetics
genomes
Genetics
6 months ago
JP Carter
▴ 40
0
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3
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705
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Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
MultipleComparison
DESeq2
Genetics
contrasts
RNASeq
updated 10 months ago by
James W. MacDonald
66k • written 10 months ago by
a26fd14e
• 0
4 results • Page
1 of 1
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Replies
Comment: Cannot install oligo on Fedora
by
Guido Hooiveld
★ 4.0k
Thanks for all suggestions and getting to the bottom of this! Unfortunately, fixing C code goes way above my skill level, so I cannot contr…
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
I think the solution is for the C code in `oligo` to be updated to work with more modern versions of `zlib`. The `zlibbioc` package is real…
Comment: Error in gseDO function
by
Guido Hooiveld
★ 4.0k
I don't fully understand what you are asking... Yet, in my opinion it doesn't make sense to use the results of only 12 genes for ORA (nor G…
Comment: Counter-directional LFC shrinkage
by
ATpoint
★ 4.2k
Is this RNA-seq? The unshrunken MA-plot looks very odd and indicates that normalization is completely offset.
Answer: ChAMP not available for bioconductor 3.19
by
shepherl
3.9k
See https://support.bioconductor.org/p/9158324/#9158336 . We have reached out to goseq to fix the package; we have a community member …
Votes
A: DESeq2: add annotations (from data frame) to DESeqDataSet
Answer: Error in gseDO function
Comment: what the test method for enrichGO in clusterProfiler?
A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
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Wei Shi
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Gordon Smyth
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United States,
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