Bioconductor Goprofiles

Showing : goprofiles • reset

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686

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GO.db GOfuncR GO GOSim goProfiles

updated 19 months ago by Basti ▴ 780 • written 19 months ago by yeluo • 0

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2.9k

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goprofiles AnnotationForge Bimap GO

9.6 years ago artur ▴ 80

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GO goProfiles GO goProfiles

10.1 years ago Arnaud Mounier ▴ 40

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GO Organism goProfiles GO Organism goProfiles

10.7 years ago Marc Carlson ★ 7.2k

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goProfiles goProfiles

10.7 years ago Guest User ★ 13k

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goProfiles GeneAnswers goProfiles GeneAnswers

updated 11.2 years ago by Marc Carlson ★ 7.2k • written 11.2 years ago by Jose M Garcia Manteiga ▴ 310

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GO goProfiles GO goProfiles

updated 11.6 years ago by Steve Lianoglou ★ 13k • written 11.6 years ago by Guest User ★ 13k

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GO goProfiles GO goProfiles

updated 13.9 years ago by Marc Carlson ★ 7.2k • written 13.9 years ago by Xiaohui Wu ▴ 280

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1.2k

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GO Cancer Prostate goProfiles GO Cancer Prostate goProfiles

updated 13.9 years ago by James W. MacDonald 65k • written 13.9 years ago by Xiaohui Wu ▴ 280

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780

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Category goProfiles Category goProfiles

13.9 years ago wei tie ▴ 30

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Annotation GO topGO goProfiles Annotation GO topGO goProfiles

14.7 years ago Johannes Hanson ▴ 30

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898

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GO graph goProfiles GO graph goProfiles

14.9 years ago Jean-Pierre Desvignes ▴ 60

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1.8k

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goProfiles goProfiles

updated 14.9 years ago by Steve Lianoglou ★ 13k • written 14.9 years ago by Massimo Pinto ▴ 390

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1.1k

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GO mouse4302 goProfiles GO mouse4302 goProfiles

updated 15.9 years ago by Alex Sanchez ▴ 20 • written 15.9 years ago by Straubhaar, Juerg ▴ 300

14 results • Page 1 of 1

Recent ...

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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0

Thanks Gordon for the advice! I ran fgsea, gsva and camera(), the most significant pathways are different. For the purpose of finding pathw…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Comment: fgsea significant result by Chris • 0

Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…

Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0

Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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