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goprofiles
•
reset
3
votes
9
replies
1.9k
views
Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles
AnnotationForge
Bimap
GO
7.7 years ago
artur
▴ 80
0
votes
0
replies
1.2k
views
Ontology lack in goProfiles : no BP or CC just MF
GO
goProfiles
GO
goProfiles
8.1 years ago
Arnaud Mounier
▴ 40
0
votes
0
replies
928
views
error while using goProfiles package on arabidopsis entrez gene IDs
GO
Organism
goProfiles
GO
Organism
goProfiles
8.8 years ago
Marc Carlson
★ 7.2k
0
votes
0
replies
1.4k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles
goProfiles
8.8 years ago
Guest User
★ 12k
0
votes
2
replies
713
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
updated 9.3 years ago by
Marc Carlson
★ 7.2k • written 9.3 years ago by
Jose M Garcia Manteiga
▴ 310
0
votes
2
replies
672
views
Profiles
GO
goProfiles
GO
goProfiles
updated 9.6 years ago by
Steve Lianoglou
13k • written 9.6 years ago by
Guest User
★ 12k
0
votes
2
replies
709
views
How to make my own GO.db?
GO
goProfiles
GO
goProfiles
updated 11.9 years ago by
Marc Carlson
★ 7.2k • written 11.9 years ago by
Xiaohui Wu
▴ 280
0
votes
1
reply
841
views
How to cluster genes based on their GO term in Arabidopsis?
GO
Cancer
Prostate
goProfiles
GO
Cancer
Prostate
goProfiles
updated 11.9 years ago by
James W. MacDonald
59k • written 11.9 years ago by
Xiaohui Wu
▴ 280
0
votes
0
replies
527
views
Problem about using "goProfiles"
Category
goProfiles
Category
goProfiles
12.0 years ago
wei tie
▴ 30
0
votes
0
replies
683
views
How to compare GO results
Annotation
GO
topGO
goProfiles
Annotation
GO
topGO
goProfiles
12.7 years ago
Johannes Hanson
▴ 30
0
votes
0
replies
604
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
12.9 years ago
Jean-Pierre Desvignes
▴ 60
0
votes
8
replies
1.2k
views
PreProcess and Limma 'done'. What directions now?
goProfiles
goProfiles
updated 13.0 years ago by
Steve Lianoglou
13k • written 13.0 years ago by
Massimo Pinto
▴ 390
0
votes
2
replies
776
views
namespace error with goProfiles package
GO
mouse4302
goProfiles
GO
mouse4302
goProfiles
updated 14.0 years ago by
Alex Sanchez
▴ 20 • written 14.0 years ago by
Straubhaar, Juerg
▴ 300
13 results • Page
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Comment: Error in h(simpleError(msg, call)) : when calling makeOrgPackagefromNCBI()
by
Lan Anh
• 0
Hello, Sorry for the late answer, I called several packages after my error and I do not know how it worked after that. Thank you for the h…
Comment: LogFC values in edgeR - w/wo intercept
by
JK Kim
• 0
Thanks, Dr. Smyth!
Comment: LogFC values in edgeR - w/wo intercept
by
JK Kim
• 0
Oops. I just corrected the URL. Thank you Dr. Smyth.
Comment: Fail to run RupRadar
by
Qingwei
• 0
Dear Sergi, Yeah, it works. ```r dm <- analyzeDuprates(bamDuprm,gtf,stranded,paired,threads, GTF.featureType="cDNA_match", GTF.attrType="ID…
Comment: LogFC values in edgeR - w/wo intercept
by
Gordon Smyth
45k
The link you've entered for "A guide to creating design matrices for gene expression experiments" doesn't work. Could you please correct th…
Votes
Comment: LogFC values in edgeR - w/wo intercept
Answer: LogFC values in edgeR - w/wo intercept
Answer: LogFC values in edgeR - w/wo intercept
Answer: broken chain import in liftOver
Answer: toGRanges help!
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