Showing : goprofiles • reset
3
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Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles AnnotationForge Bimap GO
7.1 years ago artur ▴ 80
0
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0
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1.1k
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Ontology lack in goProfiles : no BP or CC just MF
GO goProfiles GO goProfiles
7.5 years ago Arnaud Mounier ▴ 40
0
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0
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859
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error while using goProfiles package on arabidopsis entrez gene IDs
GO Organism goProfiles GO Organism goProfiles
8.2 years ago Marc Carlson ★ 7.2k
0
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0
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1.3k
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error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles goProfiles
8.2 years ago Guest User ★ 12k
0
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2
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655
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Gene Ontologies exploration
goProfiles GeneAnswers goProfiles GeneAnswers
updated 8.7 years ago by ★ 7.2k • written 8.7 years ago by ▴ 310
0
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2
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613
views
Profiles
GO goProfiles GO goProfiles
updated 9.0 years ago by 13k • written 9.0 years ago by ★ 12k
0
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2
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631
views
How to make my own GO.db?
GO goProfiles GO goProfiles
updated 11.3 years ago by ★ 7.2k • written 11.3 years ago by ▴ 280
0
votes
1
reply
760
views
How to cluster genes based on their GO term in Arabidopsis?
GO Cancer Prostate goProfiles GO Cancer Prostate goProfiles
updated 11.3 years ago by 58k • written 11.3 years ago by ▴ 280
0
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0
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482
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Problem about using "goProfiles"
Category goProfiles Category goProfiles
11.3 years ago wei tie ▴ 30
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0
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623
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How to compare GO results
Annotation GO topGO goProfiles Annotation GO topGO goProfiles
12.1 years ago Johannes Hanson ▴ 30
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0
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561
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plotProfiles (goProfiles) and bitmap
GO graph goProfiles GO graph goProfiles
12.3 years ago Jean-Pierre Desvignes ▴ 60
0
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8
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1.0k
views
PreProcess and Limma 'done'. What directions now?
goProfiles goProfiles
updated 12.4 years ago by 13k • written 12.4 years ago by ▴ 390
0
votes
2
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706
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namespace error with goProfiles package
GO mouse4302 goProfiles GO mouse4302 goProfiles
updated 13.3 years ago by ▴ 20 • written 13.3 years ago by ▴ 300
13 results • Page 1 of 1
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Replies
Comment: Error connecting to external databases through celldex by swbarnes2 ▴ 890
That line of code works. I don't think that's the right location for the data, because I can get to it by browser, so my org has not locke…
Answer: DESeq2 PCA by swbarnes2 ▴ 890
Didn't you google the function? https://www.rdocumentation.org/packages/DESeq2/versions/1.12.3/topics/plotPCA > Arguments > obj…
Comment: Model matrix not full rank, then by Sonia • 0
Thank you for that very thorough answer- that's really helpful.
Answer: JAVA_HOME cannot be determined on Windows on Bioconductor platform report by Hervé Pagès 15k
This is the wrong place to ask questions about package development or our daily builds. Please ask on the bioc-devel mailing for that. Than…
Comment: Model matrix not full rank, then by James W. MacDonald 58k
No, that's not what I am saying at all. What I am saying is that having different numbers of replicates for various subjects is problematic…
Votes
A: DESeq2 for big data sets
Answer: Extracting a list of genes from the Gene Expression Omnibus with Geoquery.
Answer: Error connecting to external databases through celldex
Answer: Error connecting to external databases through celldex
Switching RNAseq count data to explanatory variable?
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