Showing : graph • reset
0
votes
0
replies
765
views
toDotR ignores edgeData
graph graph
17.2 years ago Altmann, Michael ▴ 30
1
vote
4
replies
4.4k
views
Rgraphviz fontsize
GO graph Rgraphviz GO graph Rgraphviz
updated 17.2 years ago by 6.7k • written 17.2 years ago by ▴ 80
0
votes
2
replies
1.7k
views
Adding a text label to the classvec colour bar in heatplot
Clustering Cancer graph GLAD Clustering Cancer graph GLAD
updated 17.3 years ago by ▴ 460 • written 17.3 years ago by ★ 6.5k
0
votes
4
replies
2.0k
views
Adding a text label to the classvec colour bar in heatplot
Clustering Cancer graph Clustering Cancer graph
updated 17.4 years ago by ▴ 460 • written 17.4 years ago by ▴ 510
0
votes
0
replies
1.0k
views
Adding a text label to the classvec colour bar in heatplot
graph graph
17.4 years ago Amy Mikhail ▴ 460
0
votes
2
replies
1.3k
views
plot overlay
graph graph
updated 17.4 years ago by ▴ 30 • written 17.4 years ago by ▴ 190
0
votes
1
reply
1.2k
views
updateGraph & deprecated edgemode slot
graph graph
updated 17.4 years ago by ▴ 570 • written 17.4 years ago by ★ 1.1k
0
votes
0
replies
1.4k
views
affycoretools vennSelect problem
Annotation GO Survival probe annotate genefilter affy graph limma gcrma annaffy RBGL
17.4 years ago Nick Henriquez ▴ 20
0
votes
2
replies
1.5k
views
affycoretools vennSelect problem
GO Survival annotate genefilter affy graph gcrma annaffy RBGL GOstats biomaRt affyio
updated 17.4 years ago by 68k • written 17.4 years ago by ▴ 30
0
votes
0
replies
908
views
parameters in graph.par in Rgraphviz
graph graph
17.5 years ago Paolo Innocenti ▴ 320
0
votes
2
replies
1.6k
views
heatmap and cluster with marray
graph graph
updated 17.5 years ago by 21k • written 17.5 years ago by ▴ 340
0
votes
7
replies
2.0k
views
Pairs plots in lumi, plots look different?
Microarray graph Microarray graph
updated 17.6 years ago by ★ 1.2k • written 17.6 years ago by ▴ 20
0
votes
1
reply
1.6k
views
Bug report: Help pages for degree (package graph) not displayed
Cancer graph SNAData Cancer graph SNAData
updated 17.6 years ago by ★ 1.6k • written 17.6 years ago by 25k
0
votes
0
replies
1.1k
views
Bug report: Help pages for degree (package graph) not displayed
graph SNAData graph SNAData
17.6 years ago Zembower, Kevin ▴ 50
0
votes
1
reply
994
views
can't load Rgraphviz under BioC 2.2 devel version
graph Rgraphviz graph Rgraphviz
updated 17.6 years ago by ▴ 540 • written 17.6 years ago by ★ 1.6k
0
votes
3
replies
1.4k
views
two histograms in one graph
graph graph
updated 17.7 years ago by ▴ 430 • written 17.7 years ago by ▴ 50
0
votes
8
replies
2.0k
views
two-line labels in GO graphs
GO graph GO graph
updated 17.7 years ago by ★ 7.2k • written 17.7 years ago by ★ 3.4k
0
votes
3
replies
1.5k
views
oneChannelGUI problem
graph oneChannelGUI graph oneChannelGUI
updated 17.8 years ago by ▴ 500 • written 17.8 years ago by ▴ 320
0
votes
0
replies
1.4k
views
How to use the same node layout for a set of graph plots using graph and Rgraphviz?
Cancer graph Rgraphviz Cancer graph Rgraphviz
17.8 years ago Rand, Hugh ▴ 50
0
votes
2
replies
1.4k
views
fontsize in Rgraphviz
GO graph Rgraphviz GO graph Rgraphviz
updated 17.8 years ago by ▴ 540 • written 17.8 years ago by ▴ 830
0
votes
0
replies
668
views
questions on lumi
graph lumi graph lumi
18.0 years ago Pan Du ★ 1.2k
0
votes
0
replies
902
views
GO graph plotting with some in color
GO Clustering graph PROcess GO Clustering graph PROcess
18.0 years ago Loren Engrav ★ 1.0k
0
votes
0
replies
1.1k
views
Edge color knowing only outgoing node
GO graph GO graph
18.0 years ago Loren Engrav ★ 1.0k
0
votes
5
replies
1.5k
views
GO graph plotting with some in color
GO graph Rgraphviz GO graph Rgraphviz
18.0 years ago Loren Engrav ★ 1.0k
0
votes
0
replies
1.2k
views
Problems with k-cliq definition and calculations using RBGL package
Proteomics graph RBGL Proteomics graph RBGL
18.1 years ago Chanchal Kumar ▴ 130
0
votes
1
reply
1.6k
views
Bioconductor 2.1 is released
SNP Microarray SAGE Annotation Bayesian Regression GUI CGH hgu95av2 graph Rgraphviz SNP
18.2 years ago Hervé Pagès 16k
0
votes
2
replies
1.4k
views
slow graph methods
SystemsBiology graph SystemsBiology graph
updated 18.2 years ago by ★ 7.4k • written 18.2 years ago by 25k
0
votes
2
replies
1.6k
views
problem with probes2tableBM
Annotation GO Survival hgu133a2 annotate genefilter affy graph gcrma matchprobes GOstats
updated 18.2 years ago by ▴ 500 • written 18.2 years ago by ▴ 510
0
votes
1
reply
958
views
graph package: how to combine two graphs to create a third?
graph graph
updated 18.2 years ago by ▴ 510 • written 18.2 years ago by ★ 1.1k
0
votes
0
replies
1.2k
views
biomaRt -> XML::addNode masks graph
SystemsBiology Cancer graph biomaRt SystemsBiology Cancer graph biomaRt
18.2 years ago Seth Falcon ★ 7.4k
0
votes
7
replies
1.9k
views
slow insertions in to graphNEL object (24 hours for 16k nodes)
graph graph
updated 18.2 years ago by ★ 7.4k • written 18.2 years ago by ★ 1.1k
0
votes
4
replies
2.6k
views
disagreement between biomaRt and topGO
GO hgu133plus2 annotate geneplotter graph Rgraphviz PROcess goTools biomaRt Category GO
updated 18.2 years ago by ▴ 500 • written 18.2 years ago by ★ 1.4k
0
votes
1
reply
1.5k
views
Getting top level GO category for a list of genes
GO graph biomaRt GO graph biomaRt
updated 18.2 years ago by ▴ 500 • written 18.2 years ago by ▴ 10
0
votes
7
replies
2.3k
views
problem with GOstats, developmental version?
GO Survival hgu95av2 annotate affy affydata graph Rgraphviz limma gcrma matchprobes GO
updated 18.2 years ago by ★ 7.4k • written 18.2 years ago by ★ 2.2k
0
votes
10
replies
2.7k
views
comparing GO lists
Annotation GO Cancer graph GOstats Annotation GO Cancer graph GOstats
updated 18.4 years ago by ▴ 130 • written 18.4 years ago by ★ 5.5k
0
votes
5
replies
1.5k
views
how to store multiple relationships between nodes in graphNEL?
graph graph
updated 18.4 years ago by ★ 7.4k • written 18.4 years ago by ★ 1.1k
0
votes
2
replies
2.7k
views
Rgraphviz - how to use node positions from one graph as node positions in another?
graph graph
updated 18.4 years ago by ▴ 510 • written 18.4 years ago by ▴ 50
0
votes
1
reply
1.3k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer Ruuid tkWidgets graph GOstats Cancer Ruuid tkWidgets graph GOstats
updated 18.4 years ago by ▴ 10 • written 18.4 years ago by ★ 7.4k
0
votes
0
replies
1.1k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid tkWidgets graph GOstats Ruuid tkWidgets graph GOstats
18.4 years ago Michael Parisi ▴ 10
0
votes
11
replies
2.5k
views
'recursive default argument' error in GOENTREZID2GO
GO Biobase genefilter graph Category GO Biobase genefilter graph Category
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ▴ 260
0
votes
3
replies
1.2k
views
help with rendering layers in Rgraphviz
graph Rgraphviz graph Rgraphviz
updated 18.5 years ago by ★ 6.5k • written 18.5 years ago by ▴ 830
0
votes
9
replies
2.5k
views
problem with duplicateCorrelation and ExpressionSet objects
GO Survival cdf Biobase graph limma gcrma annaffy affyPLM simpleaffy biomaRt Category
updated 18.5 years ago by ★ 7.4k • written 18.6 years ago by ★ 2.2k
0
votes
0
replies
1.3k
views
Problem with customised endnode list in ontoCompare(goToolspackage)
Microarray GO graph goTools Category oligo Microarray GO graph goTools Category oligo
18.6 years ago Paquet, Agnes ▴ 500
0
votes
5
replies
1.8k
views
Package "graph": bug in function addEdge
graph graph
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 20
0
votes
0
replies
1.4k
views
RBGL: bfs & dfs with directed graphs
GO Biobase annotate geneplotter graph Rgraphviz annaffy RBGL convert GO Biobase graph
18.6 years ago stephen edwards ▴ 10
0
votes
3
replies
2.3k
views
Can't get RCurl...
GO Survival annotate genefilter affy graph limma GOstats biomaRt Category affycoretools
updated 18.7 years ago by 68k • written 18.7 years ago by ★ 2.2k
0
votes
1
reply
1.4k
views
topTable "resort.by" broken...
GO Survival Biobase annotate genefilter affy affydata graph gcrma matchprobes annaffy
updated 18.7 years ago by 53k • written 18.7 years ago by ★ 2.2k
0
votes
1
reply
1.7k
views
question about limma2annaffy
GO Survival Biobase annotate genefilter geneplotter affy affydata graph limma annaffy
updated 18.7 years ago by 68k • written 18.7 years ago by ★ 2.2k
0
votes
0
replies
734
views
bugfix in graph::ftM2graphNEL
graph graph
18.8 years ago Wolfgang Huber ★ 13k
0
votes
4
replies
1.6k
views
ftM2graphNEL unexpected error
graph graph
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ▴ 50
360 results • Page 5 of 8
Recent ...
Replies
Answer: two questions about limma by Gordon Smyth 53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: upstream git branches of bioc-release by TrentonCollier99 • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release by Jeroen ▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Awards • All
Popular Question to shepherl 4.2k
Popular Question to Gordon Smyth 53k
Popular Question to k___ ▴ 30
Popular Question to efoss ▴ 10
Popular Question to James W. MacDonald 68k
Locations • All
United States, just now
United States, 39 minutes ago
The city by the bay, 50 minutes ago
United States, 1 hour ago
United States, 2 hours ago
Traffic: 761 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6