Bioconductor Grohmm

Showing : grohmm • reset

0

votes

1

reply

392

views

groHMM

updated 19 months ago by Mike Smith ★ 6.2k • written 19 months ago by anusha.nagari ▴ 50

5

votes

3

replies

862

views

groSeq groHMM

updated 5.2 years ago by anusha.nagari ▴ 50 • written 5.2 years ago by jsalsager ▴ 70

3

votes

2

replies

1.1k

views

grohmm groseq next-generation sequencing R

5.2 years ago jsalsager ▴ 70

0

votes

3

replies

878

views

groHMM

updated 5.4 years ago by lee.kraus • 0 • written 5.4 years ago by warrena • 0

4 results • Page 1 of 1

Recent ...

Replies

Comment: Why is DMRcate not available for Bioconductor version 3.18? by Daniel E. Weeks ▴ 20

Thank you for the explanation and contacting the DSS package authors.

Comment: Why is DMRcate not available for Bioconductor version 3.18? by shepherl 3.6k

The DSS package authors just need to add `edgeR` to their Suggest of their DESCRIPTION. They have been contacted about it but have not acte…

Answer: GOslim missing GO term by James W. MacDonald 64k

I think it's because that GO term isn't an offspring of any term in the GO slim you are downloading. ``` > ids<- "GO:0002831" > slim <…

Answer: Obtaining rsIDs with ENSG and variant ID information by Robert Castelo ★ 3.0k

You should first and foremost find out what was the human reference genome version from which your dataset was derived. Assuming this was G…

Comment: DESeq2 - groups with biological replicates from the same patient by James W. MacDonald 64k

If by clustering you mean there might be a within-subject correlation, then yes it's a possibility. But you cannot control for that using a…

Votes

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Comment: limma::voom vs edgeR::voomLmFit - when to use?

Answer: limma::voom vs edgeR::voomLmFit - when to use?

Awards • All

Scholar to James W. MacDonald 64k

Scholar to Assa Yeroslaviz ★ 1.5k