Bioconductor Gsva

Showing : gsva • reset

votes

replies

1.2k

views

GSVA RNASeq limma

updated 10 months ago by Gordon Smyth 50k • written 10 months ago by Jonathan ▴ 10

votes

replies

153

views

fgsea GSVA CAMERA

updated 1 day ago by Robert Castelo ★ 3.3k • written 1 day ago by Chris • 0

vote

replies

495

views

GSVA

updated 27 days ago by James W. MacDonald 65k • written 28 days ago by Lucy ▴ 60

votes

410

views

GSVA

updated 8 months ago by Robert Castelo ★ 3.3k • written 8 months ago by Heba • 0

votes

replies

1.8k

views

GSVA

updated 8 weeks ago by Moritz ▴ 10 • written 2.9 years ago by resa • 0

votes

replies

1.7k

views

escape UCell GSVA

updated 5 months ago by arina • 0 • written 14 months ago by Omer • 0

votes

replies

20k

views

ssgsea gsva piano egsea

updated 5 months ago by amin8w ▴ 10 • written 6.8 years ago by sina.nassiri ▴ 130

vote

replies

541

views

GSVA

23 days ago • updated 22 days ago Alex • 0

vote

635

views

ssgsea GSVA biotype proteincoding msigdb

updated 5 months ago by Robert Castelo ★ 3.3k • written 5 months ago by snijesh ▴ 20

votes

replies

views

GSVA

8 days ago Chris • 0

10 results • Page 1 of 1

Recent ...

Replies

Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu by James W. MacDonald 65k

I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?

Answer: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you fit a cell means model (without an intercept), you will have to construct contrasts using `makeContrasts` and fit them using `contra…

Comment: Memory errors using read.bismark? by Juan Higareda • 0

Thanks a lot Peter, We solved the problem, IT had implemented a policy of RAM usage that started a conflict with any RAM-hungry process, m…

Answer: meffil.snp.concordance by James W. MacDonald 65k

This support site is meant to help people with technical questions about Bioconductor packages. The `meffil` package is not Bioconductor, n…

Answer: minfi latest update for EPIC V2 chip by James W. MacDonald 65k

Zuguang Gu submitted both of those packages as part of the current release, and I submitted a PR for `minfi` so it will now distinguish the…

Votes

Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Awards • All