Bioconductor Biotype

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6.8k

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ssgsea GSVA biotype proteincoding msigdb

updated 17 months ago by tifaGis • 0 • written 2.3 years ago by snijesh ▴ 200

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2.3k

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grch37 transcripts biotype biomaRt ncrna

updated 7.5 years ago by James W. MacDonald 68k • written 7.5 years ago by sergio.martinezcuesta ▴ 10

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2.5k

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DESeq2 PCA rlog transformation biotype

7.9 years ago JoannaF ▴ 10

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1.4k

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scater sce biotype R

updated 8.0 years ago by Aaron Lun ★ 29k • written 8.0 years ago by thebadpenny • 0

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1.9k

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biomart TF biotype ensembl mus musculus

updated 8.1 years ago by Mike Smith ★ 6.6k • written 8.1 years ago by rbronste ▴ 60

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Answer: Unable to find ENTREZ IDs by James W. MacDonald 68k

Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…

Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0

Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…

Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0

Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …

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Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?

Answer: Can sample-level weights be used when analysing GSVA scores in limma?

Comment: Can sample-level weights be used when analysing GSVA scores in limma?

Answer: Issue loading and downloading Bioconductor 3.22 packages after update

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