Bioconductor Gsva

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ssgsea gsva piano egsea

updated 5 months ago by amin8w ▴ 10 • written 6.8 years ago by sina.nassiri ▴ 130

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327

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fgsea GSVA CAMERA

13 days ago • updated 4 days ago Chris ▴ 10

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1.3k

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GSVA RNASeq limma

updated 10 months ago by Gordon Smyth 50k • written 10 months ago by Jonathan ▴ 10

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GSVA

updated 10 weeks ago by Moritz ▴ 10 • written 2.9 years ago by resa • 0

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1.7k

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escape UCell GSVA

updated 5 months ago by arina • 0 • written 15 months ago by Omer • 0

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522

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GSVA

updated 5 weeks ago by James W. MacDonald 65k • written 5 weeks ago by Lucy ▴ 60

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696

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ssgsea GSVA biotype proteincoding msigdb

updated 5 months ago by Robert Castelo ★ 3.3k • written 5 months ago by snijesh ▴ 20

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717

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GSVA

5 weeks ago • updated 4 weeks ago Alex • 0

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GSVA

20 days ago Chris ▴ 10

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422

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GSVA

updated 8 months ago by Robert Castelo ★ 3.3k • written 8 months ago by Heba • 0

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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0

thank you!

Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k

coldata_rat <- data.frame(conditions=..., batch=...)

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0

Thank you all for your comments. I will follow your suggestions.

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…

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biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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