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gwascat
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5
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4
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1.9k
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[gwascat] Updated GWAS catalog from file
gwascat
6.4 years ago
enricoferrero
▴ 660
1
vote
4
replies
1.4k
views
Errors when trying to install 'gwscat' on ubuntu with R 4.0.3
GWASTools
gwascat
updated 3.4 years ago by
Mike Smith
★ 6.5k • written 3.4 years ago by
wmov98
▴ 10
1
vote
2
replies
1.0k
views
Incomplete GWAS Catalog Data from makeCurrentGwascat()
gwascat
r
3.3 years ago
anailis
• 0
0
votes
1
reply
1.2k
views
problem loading gwascat and ggbio
gwascat
ggbio
Mac
7.9 years ago
jameshunterbr
• 0
0
votes
0
replies
713
views
gwascat: error regarding mismatched genome builds when using makeCurrentGwascat()
gwascat
4.8 years ago
maya.kappil
▴ 30
1
vote
2
replies
1.3k
views
[gwascat] makeCurrentGwascat() fails
gwascat
8.1 years ago
enricoferrero
▴ 660
0
votes
0
replies
531
views
gwascat Liftover Fails Silently
gwascat
3.3 years ago
anailis
• 0
7 results • Page
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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