Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
intersect
•
reset
5
votes
9
replies
9.2k
views
subsetByOverlaps : comparing GRANGES and keeping all the information in the METACOLUMNS
granges
bedtools
intersect
updated 5.7 years ago by
lee.s
▴ 70 • written 5.7 years ago by
Bogdan
▴ 670
0
votes
9
replies
2.7k
views
IRanges: reduce(), findOverlaps(), and intersect() by group
iranges
findoverlaps
intersect
group
8.4 years ago
pesquivel
• 0
2
votes
8
replies
5.3k
views
GenomicRanges: identify overlapping regions, get intersection between each overlapping pair and add gene coordinates (start, end, strand and ids)
genomicranges
overlap
intersect
findoverlaps
6.3 years ago
Caroline Grisbach Meissner
▴ 10
3
votes
5
replies
1.6k
views
Extract coordinates of overlapping genomic intervals
genomicranges
findoverlaps
intersect
updated 7.8 years ago by
Steve Lianoglou
★ 13k • written 7.8 years ago by
rubi
▴ 110
0
votes
4
replies
3.4k
views
[Solved]Preserve metadata column for retrieving common regions from two GRanges objects
granges
intersect
8.2 years ago
Jurat Shahidin
▴ 80
5
votes
2
replies
562
views
Intersecting two big dataframe
genomicrange
intersect
updated 4.1 years ago by
James W. MacDonald
65k • written 4.1 years ago by
AZ
▴ 30
6
votes
2
replies
4.8k
views
How to get the intersect and get the difference of a grange object while keeping meta data
genomicranges
intersect
updated 7.9 years ago by
shepherl
3.9k • written 8.0 years ago by
zlskidmore
▴ 30
0
votes
2
replies
896
views
feel confused when identifying overlapping regions by intersect method
GenomicRanges
overlaps
intersect
updated 5.2 years ago by
Michael Lawrence
★ 11k • written 5.2 years ago by
fjia304
• 0
0
votes
1
reply
902
views
intersect ranges from a GAlignment object with a GRangesList
intersect
grangeslist
galignment
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
ccanchaya
• 0
9 results • Page
1 of 1
Recent ...
Replies
Comment: error running enricher from clusterprofiler
by
Yael
• 0
It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Thanks again Guido, I will try to run the script you have suggested and see if I can install the package. Yes, I have seen this message a…
Votes
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
Answer: SGSeq: moving toward diffex from SGSeq analysis
Awards
• All
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
boczniak767
▴ 720
Popular Question
to
jmoon1194
• 0
Popular Question
to
mat.lesche
▴ 90
Popular Question
to
jordi.planells
• 0
Locations
• All
France,
just now
United States,
10 minutes ago
Israel,
15 minutes ago
United States,
15 minutes ago
United States,
16 minutes ago
Traffic: 945 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6