Bioconductor Kmeans

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EdgeR clustering differential gene expression consensusclusterplus kmeans

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by anupriya.dalmia • 0

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kmeans gene expression clustering

7.1 years ago • updated 7.0 years ago Jane Merlevede ▴ 90

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pheatmap kmeans

7.1 years ago Assa Yeroslaviz ★ 1.5k

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cluster mclust limma clusplot kmeans

9.3 years ago svlachavas ▴ 830

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Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Ai • 0

Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …

Answer: Annotation for EPICv2 by icecreamlover • 0

Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…

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