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maendtoend
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Problem in installing maEndToEnd package
microarray
maEndToEnd
4.8 years ago • updated 4.6 years ago
Jack
• 0
0
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2
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845
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Need Guidance Regarding the Results of Microarray Pipeline
microarray
maEndtoEnd
updated 5.6 years ago by
Gordon Smyth
50k • written 5.6 years ago by
salmatariq080
• 0
0
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maEndtoEnd does not load on Mac version 3.6.0 or 3.6.2
maEndtoEnd
4.1 years ago
Ndimensional
▴ 20
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Comment: Couldn't connect to server while using "pathways"
by
ATpoint
★ 4.1k
Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…
Answer: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of unavailability.…
Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
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