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MeDIP-chip data analysis.
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13.6 years ago Jinyan Huang ▴ 50
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Help on ROC analysis
Genetics MEDME ASSIGN Genetics MEDME ASSIGN
14.3 years ago Susan Bosco ▴ 80
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Help on ROC Analysis
Genetics ROC MEDME Genetics ROC MEDME
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 80
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Help on ROC Analysis.
Microarray ROC MEDME Microarray ROC MEDME
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 260
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Help to understand logistic model used in MEDME
Genetics MEDME Genetics MEDME
updated 14.5 years ago by ★ 4.2k • written 14.5 years ago by ▴ 80
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assistance to understand MEDME
MEDME MEDME
updated 15.0 years ago by ▴ 200 • written 15.0 years ago by ▴ 90
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MEDME for MeDIP on Affymetrix promoter arrays
PROcess MEDME PROcess MEDME
updated 15.1 years ago by ▴ 200 • written 15.1 years ago by ▴ 330
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Request for the assistance to use MEDME
Microarray Normalization Organism probe limma MEDME cycle ASSIGN Microarray Normalization
updated 15.3 years ago by ▴ 30 • written 15.3 years ago by ▴ 90
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FW: Request for the assistance to use MEDME
Normalization Organism probe MEDME cycle ASSIGN Normalization Organism probe MEDME cycle
updated 15.4 years ago by ▴ 30 • written 15.4 years ago by ▴ 90
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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by gene_bioconductor ▴ 10
Thanks for your thoughtful and detailed comment, Gordon
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0
I looked into the genomic distributions. Please see the screenshot attatched ![ distrubution for female loci, boot1 and boot2][1] how do …
Answer: How to save the DEXSeq results by Michael Love 41k
If you look at the output here: https://bioconductor.org/packages/release/bioc/vignettes/DEXSeq/inst/doc/DEXSeq.html#4_Testing_for_differe…
Answer: Method to find pathways different between 2 groups by Robert Castelo ★ 3.3k
Hi, regarding how could you combine the result from each tool, one option is using a so-called "ensembl method", for instance, the package …
Answer: Couldn't connect to server while using "pathways" by James W. MacDonald 65k
As ATpoint already noted, you should proceed from the assumption that your audience knows nothing about what you are doing, and provide eno…
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Answer: Method to find pathways different between 2 groups
Answer: Method to find pathways different between 2 groups
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Method to find pathways different between 2 groups
Comment: Trying to use enrichGO
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