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Help to understand logistic model used in MEDME
Genetics MEDME Genetics MEDME
updated 14.5 years ago by ★ 4.2k • written 14.5 years ago by ▴ 80
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Help on ROC Analysis
Genetics ROC MEDME Genetics ROC MEDME
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 80
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assistance to understand MEDME
MEDME MEDME
updated 15.0 years ago by ▴ 200 • written 15.0 years ago by ▴ 90
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MEDME for MeDIP on Affymetrix promoter arrays
PROcess MEDME PROcess MEDME
updated 15.1 years ago by ▴ 200 • written 15.1 years ago by ▴ 330
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Help on ROC Analysis.
Microarray ROC MEDME Microarray ROC MEDME
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 260
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MeDIP-chip data analysis.
MEDME MEDME
13.6 years ago Jinyan Huang ▴ 50
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FW: Request for the assistance to use MEDME
Normalization Organism probe MEDME cycle ASSIGN Normalization Organism probe MEDME cycle
updated 15.4 years ago by ▴ 30 • written 15.4 years ago by ▴ 90
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Request for the assistance to use MEDME
Microarray Normalization Organism probe limma MEDME cycle ASSIGN Microarray Normalization
updated 15.3 years ago by ▴ 30 • written 15.3 years ago by ▴ 90
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Help on ROC analysis
Genetics MEDME ASSIGN Genetics MEDME ASSIGN
14.3 years ago Susan Bosco ▴ 80
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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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