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Retrieving Package Metadata from Bioconductor API: Versions and Dependencies
metaMSdata
updated 14 months ago by 4.2k • written 14 months ago by • 0
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Spam: How do professional SEO services enhance user experience on my website?
metaMSdata
15 months ago Steven 0
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How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata Bioconductor
15 months ago Abiologist • 0
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News: Stop mirror service
metaMSdata
updated 16 months ago by 4.2k • written 16 months ago by • 0
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Can log2cpm be used for proteomics data normalization?
metaMSdata
17 months ago Daniel • 0
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featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_get_next_read_BIN: Assertion `l_name < 256' failed. Aborted (core dumpe…
metaMSdata
17 months ago shuwangxinze1996 • 0
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Doing comparison of RNA-seq data using EdgeR
metaMSdata edgeR
updated 18 months ago by 53k • written 18 months ago by • 0
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Visium RNA
metaMSdata
written 19 months ago by • 0
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How to control RAN-seq samples from different libraries
metaMSdata
updated 20 months ago by 68k • written 20 months ago by • 0
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Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
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Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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