Showing : metaarray • reset
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MetaArray - results - how to interpret
metaArray metaArray
updated 12.1 years ago by ▴ 250 • written 12.1 years ago by ▴ 330
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1.3k
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poe.mcmc - metaArra non-numeric matrix extent error
MergeMaid metaArray MergeMaid metaArray
12.1 years ago Adrian Johnson ▴ 330
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2
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1.1k
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poe.mcmc - phenotypic label - coding
metaArray metaArray
updated 13.1 years ago by ▴ 40 • written 13.1 years ago by ▴ 740
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2
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4.6k
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Duplicated Gene IDs - averaging
convert metaArray convert metaArray
13.1 years ago boczniak767 ▴ 740
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3
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3.8k
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missing value where TRUE/FALSE needed (metaArray)
metaArray metaArray
updated 13.1 years ago by ▴ 40 • written 13.1 years ago by ▴ 740
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2
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1.7k
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Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd GeneMeta metaArray RankProd GeneMeta metaArray
13.3 years ago boczniak767 ▴ 740
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977
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POE/metaArray error
metaArray metaArray
13.9 years ago Sheena Scroggins ▴ 30
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1.2k
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missing value where TRUE/FALSE needed (metaArray)
metaArray metaArray
13.9 years ago Reema Singh ▴ 570
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1
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1.1k
views
Bug in metaArray package
GO hgu133a MergeMaid metaArray GO hgu133a MergeMaid metaArray
updated 15.3 years ago by 25k • written 15.3 years ago by ▴ 500
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996
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cross study comparison of cell populations
Cancer affy metaArray Cancer affy metaArray
16.4 years ago Max Kauer ▴ 140
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1
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998
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Help with intcor() function
metaArray metaArray
updated 17.5 years ago by ▴ 250 • written 17.5 years ago by ▴ 90
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Comment: Differential Expression Analysis with unbalanced batches without replication bet by Thili • 0
Thank you for your reply. I currently have batch-corrected data processed with scvi-tools (specifically, totalvi) and have followed the sam…
Comment: Problem at champ.load by andrew.gibbons • 0
I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…
Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0
Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…
Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k
> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Votes
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
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