updated 6.6 years ago by
Gordon Smyth
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written 6.6 years ago by
Gary
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Comment: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
by
James W. MacDonald
68k
You are. The reason I pointed you to `forgeBSgenomeDataPkgFromTwobitFile` is because it's much simpler, doesn't require a seed file, and is…
Comment: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
by
mat149
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80
I've tried the following, but I must be missing something:
setwd("C:\\Users\\....\\wd\\dump\\seqs_srcdir")
e122<-readDNA…
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
abaed
•
0
Thank you so much for your helpful response!
I have a follow-up question regarding preprocessing of the count matrix. Should steps like ge…
Comment: readDNAStringSet with non DNA characters
by
Aidan
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60
I would try to avoid converting to and from `character` objects, you'll lose the main point of having objects as `XString`/`XStringSet`.
`…
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