Bioconductor Mnn

Showing : mnn • reset

3

votes

6

replies

3.5k

views

mnn batchelor scrna-seq seurat

updated 4.7 years ago by Aaron Lun ★ 28k • written 4.7 years ago by heir_of_isildur88 • 0

2

votes

2

replies

2.1k

views

batchelor mnn scrna-seq

updated 2.5 years ago by Guandong Shang ▴ 40 • written 5.1 years ago by heir_of_isildur88 • 0

0

votes

2

replies

1.1k

views

mnnCorect MNN

5.3 years ago sharvari gujja ▴ 40

2

votes

1

reply

2.4k

views

scRNA-Seq scater scran rna-seq MNN

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by hamza_karakurt ▴ 60

4 results • Page 1 of 1

Recent ...

Replies

Answer: Find exact GRanges match keeping metadata columns by Michael Love 43k

You could use `minoverlap` but that requires an integer, not a fraction: ``` gr1 |> join_overlap_left(gr2, minoverlap=6) ``` Plyranges do…

Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k