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mnn
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3
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6
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4.3k
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Carry over variable features when converting FastMNN SCE object to Seurat object
mnn
batchelor
scrna-seq
seurat
updated 5.6 years ago by
Aaron Lun
★ 29k • written 5.6 years ago by
heir_of_isildur88
• 0
2
votes
2
replies
2.7k
views
Subclustering after MNN batch-correction
batchelor
mnn
scrna-seq
updated 3.4 years ago by
Guandong Shang
▴ 40 • written 5.9 years ago by
heir_of_isildur88
• 0
0
votes
2
replies
1.4k
views
Help with the output from mnnCorrect
mnnCorect
MNN
6.2 years ago
sharvari gujja
▴ 40
2
votes
1
reply
2.9k
views
Batch Corrections (MNN) with TPM values
scRNA-Seq
scater
scran
rna-seq
MNN
updated 6.2 years ago by
Aaron Lun
★ 29k • written 6.2 years ago by
hamza_karakurt
▴ 60
4 results • Page
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Comment: EuroBioC2026 abstract submission is open!
by
TikTsokaasocissalpc
• 0
Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…
Comment: DESeq2 on non-RNASeq counts data
by
TikTsokaasocissalpc
• 0
In data analysis, behavior differences based on data type are common. Similarly, Best EDI Software adapts to non-standard transaction volum…
Comment: blockwiseModule crashes in the end and doesn't generate modules
by
gexose2839
• 0
Sounds good. @[time][1] [1]: https://timeduration.github.io
Comment: PFAM formats changed - is it still possible to use this with ISA?
by
TikTsokaasocissalpc
• 0
For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…
Answer: segfault in edgeR glmQLFit
by
Gordon Smyth
53k
Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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