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Answer: Counter-directional LFC shrinkage
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swbarnes2
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The y axes in those plots are logged. The average for condition1 is going to be higher than condition2 because of the very high outliers. …
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Thanks for all suggestions and getting to the bottom of this! Unfortunately, fixing C code goes way above my skill level, so I cannot contr…
Comment: Cannot install oligo on Fedora
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James W. MacDonald
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I think the solution is for the C code in `oligo` to be updated to work with more modern versions of `zlib`. The `zlibbioc` package is real…
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I don't fully understand what you are asking... Yet, in my opinion it doesn't make sense to use the results of only 12 genes for ORA (nor G…
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Is this RNA-seq? The unshrunken MA-plot looks very odd and indicates that normalization is completely offset.
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