Biostar Ncbi geo

Showing : ncbi geo • reset

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632

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geoquery ncbi geo biobase

3.5 years ago cschot3 • 0

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554

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limma differential gene expression ncbi geo affymetrix microarrays

updated 3.5 years ago by Aaron Lun ★ 27k • written 3.6 years ago by Francesca McGrath • 0

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870

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frma barcode geneexpression gsm ncbi geo

updated 4.5 years ago by Matthew McCall ▴ 830 • written 4.5 years ago by diana.elassal • 0

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751

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limma microarray bioconductor ncbi geo

updated 5.4 years ago by Gordon Smyth 45k • written 5.4 years ago by kevin.m.hao ▴ 10

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2.9k

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geoquery ncbi geo geo data

5.5 years ago fongchunchan ▴ 30

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1.8k

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NCBI GEO

updated 18 months ago by SAn • 0 • written 6.3 years ago by maedakus ▴ 10

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Comment: Italicise by Kevin Blighe 3.5k

Hi, can you compare the contents of your variable, `lab_italics` , versus those of the variable (`selectLab_italics`) that is produced in m…

Comment: Need help for ProStaR Stand-alone install by Wang • 0

Hi, I have installed the "Prostar" package, and loaded in my rstudio work session. But, when I trying to use the Prostar() for open a GUI …

Answer: Discrepancy between plot colours during exomeCopy tutorial by Michael Love 37k

I’m not sure why the plot looks this way. You may want to look at one sample at a time. Also note there are more developed tools, I haven’t…

Comment: Subsetting operation on CompressedGRangesList object 'x' produces a result tha by Jiping Wang ▴ 70

that's terrific. thanks. thanks for your comment on `pcoverageByTranscript` function as well. yes, we understand it's for transcript. that…

Answer: Help with constructing design matrix for edgeR/limma by Gordon Smyth 45k

If the infertile subpopulations have different expression profiles then you need ``` design <- model.matrix(~Pathology) ``` and not includ…

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Answer: biomaRt error unable to fix: need help troubleshooting

Answer: edgeR : results from goana and kegga functions show opposite sig. p-value

Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.

DESeq2: likelihood ratio test interpretation, multifactor

Answer: edgeR : results from goana and kegga functions show opposite sig. p-value

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Teacher to Michael Love 37k