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Statistical test
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Error in (function (classes, fdef, mtable) : Function 'raster' tag 'logical' cannot find an inheritance method
NewWave
updated 22 months ago by 4.2k • written 22 months ago by • 0
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error running exp2grn
NewWave
updated 2.1 years ago by ▴ 40 • written 2.2 years ago by • 0
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featureCounts error Assertion failed: (NULL == pairer -> bam_margin_table -> appendix2), function SAM_pairer_finish_margin_table, file input-files.c,…
NewWave
2.1 years ago Kilian • 0
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Adding chromosome numbers to the respective gene ids of DESeq2 output file
NewWave hgu133a2.db
updated 2.1 years ago by ★ 5.0k • written 2.1 years ago by • 0
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Spam: 7z password remover tool
mgu74bv2cdf NewWave hgu133a2.db
2.3 years ago roma 0
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Spam: ost to pst migration software
mgu74bv2cdf NewWave hgu133a2.db
2.3 years ago roma 0
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Extracting DEG from topTags
NewWave
updated 2.4 years ago by 53k • written 2.4 years ago by • 0
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How to use txtimport and do differential expression
NewWave
updated 2.4 years ago by 68k • written 2.4 years ago by • 0
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Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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