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paired test
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paired t test question ?
paired test
written 21.1 years ago by
Phguardiol@aol.com
▴ 720
3
votes
6
replies
1.7k
views
paired and unpaired test at the same time with voom limma
limma
voom
rna-seq
paired test
unpaired test
updated 4.1 years ago by
Gordon Smyth
50k • written 4.1 years ago by
dagsbio
• 0
7
votes
4
replies
1.9k
views
paired two groups comparison using limma
paired test
limma
updated 5.9 years ago by
Aaron Lun
★ 28k • written 5.9 years ago by
fansili2013
▴ 50
0
votes
2
replies
1.2k
views
DESeq2 removing columns from model matrix implication
deseq2
multifactorial design
paired test
updated 7.2 years ago by
Michael Love
41k • written 7.2 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
1.4k
views
How can I do paired test on my Illumina 450k idat files with ChAMP package?
Illumina
450k
ChAMP
paired test
8.2 years ago
walter_teng
• 0
5 results • Page
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Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Comment: Store output of matchPWM()
by
mat149
▴ 70
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) : '…
Answer: Store output of matchPWM()
by
James W. MacDonald
65k
Something like this? ``` ind <- as.logical(sapply(hitlist, length)) out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) …
Answer: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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