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Showing :
pairwise
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1
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2
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798
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pairwise comparison + interaction term in DESeq2
DESeq2
interaction
pairwise
2.7 years ago
Lucas
• 0
0
votes
3
replies
913
views
Pairwise comparisons for "both between and within subject"experiment using DESeq2
pairwise
deseq2
extracting contrasts
resultsnames
results deseq2
updated 5.5 years ago by
Michael Love
42k • written 5.5 years ago by
Ricardo Rodrigues
• 0
0
votes
0
replies
889
views
pairwise dist from bam file
bam
diversity
distance
pairwise
6.6 years ago
achaillon
• 0
4
votes
12
replies
3.2k
views
pairwise combining factors or multifactor analysis ? (DESeq2)
deseq2
multifactor
pairwise
8.0 years ago • updated 7.9 years ago
aziza
▴ 20
0
votes
4
replies
1.3k
views
is it possible to create this comparison?
rnaseq
pairwise
multiple comparisons
deseq2
updated 8.2 years ago by
Michael Love
42k • written 8.2 years ago by
hamaor
• 0
5 results • Page
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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