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Gordon Smyth
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updated 19 days ago by
Michael Love
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updated 1 day ago by
Michael Love
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BioinfGuru
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Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
by
pangtaihin
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Thank you very much ATpoint, but DESeq2, edgeR, limma are not specialized time-course framework, I think we might seek for another framewor…
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
by
ATpoint
★
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High counts are generally less prone to noise compared to low counts. Bottom line is that you should stick to specialized testing framework…
Comment: Problem installing ChAMP on a MacBook
by
ATpoint
★
4.1k
Did you run these lines? https://www.bioconductor.org/packages/release/bioc/html/ChAMP.html
It is good practice to include code and error …
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Leonard Goldstein
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220
Looks like `sgv_pred` does not have the expected format. Was it created or edited manually? I would always recommend creating objects with …
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