Biostar PCAtools

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349

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ellipse RNAseq PCAtools

written 10 weeks ago by elizabethe819 • 0

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159

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PCAtools

4 months ago luca.s ▴ 10

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204

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PCAtools

updated 6 months ago by Kevin Blighe 3.2k • written 6 months ago by Terra • 0

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700

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biplot PCA RNASeq PCAtools

updated 7 months ago by Kevin Blighe 3.2k • written 7 months ago by mschmidt ▴ 10

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224

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PCAtools biplot DESeq2 RNASeq PCA

updated 8 months ago by Kevin Blighe 3.2k • written 8 months ago by ecg1g15 • 0

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254

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PCATools

updated 9 months ago by Kevin Blighe 3.2k • written 9 months ago by oakhamwolf • 0

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292

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EDA pcaExplorer PCAtools PCA

updated 11 months ago by Kevin Blighe 3.2k • written 11 months ago by k.vitting.seerup ▴ 100

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Comment: cant read celfiles using oligo package by scipio04 • 0

i want to get a matrix in order to do population genomic analysis after it's about SNP the answer i received was about the right packa…

Comment: Bootstrap value using ape package and including it in phylogenetic tree by Kevin Blighe 3.2k

Hi, can you please elaborate further on what is the problem by showing a screenshot? Can you please also check the contents of your objects…

Answer: extracting the KEGG pathway for a set of genes by Kevin Blighe 3.2k

Hi Bogdan, I use *KEGGprofile*, but there are other options. The main function is `find_enriched_pathway()`, and it by default accepts…

Answer: cant read celfiles using oligo package by Kevin Blighe 3.2k

Hi, It seems that you already received an answer here: https://support.bioconductor.org/p/9138838/#9138849 What do you want to do wit…

Comment: cel files with affy library by scipio04 • 0

i have same errors with oligo package tho :( i guess something 's wrong with my cel files but idon't know what

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Answer: Is there anyway to replace seqlevels in a txdb

Comment: Compilation fatal error: iostream.h: No such file or directory when installing R

Answer: tximeta countsFromAbundance for downstream analysis

A: plotPCA - how to add labels to a PCA plot

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