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Profiling bioconductor packages in a straightforward fashion
HPC
profiling
performance
3.8 years ago
Jack
• 0
0
votes
5
replies
1.9k
views
How to plot benchmark result of R/ Bioconductor package (getting curve or line graph)?
r
benchmark
performance
ggplot2
8.6 years ago
Jurat Shahidin
▴ 80
2
votes
2
replies
1.3k
views
Any way to speed up splitting relatively big GRanges objects by given threshold ?
r
granges
split
performance
updated 8.8 years ago by
Michael Lawrence
★ 11k • written 8.8 years ago by
Jurat Shahidin
▴ 80
1
vote
8
replies
3.0k
views
most efficient way to read adjacency matrix to make networkd3 graph
r
iterators
performance
updated 9.1 years ago by
phil.chapman
▴ 150 • written 9.1 years ago by
chrisclarkson100
▴ 50
1
vote
2
replies
1.7k
views
DESeq2 performance information for counts tables with very large rows number
deseq2
performance
9.4 years ago
atisou
• 0
5 results • Page
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Comment: GBCC2025: New Scholarship Opportunities Available!
by
Liona
• 0
Harbor Labs in New York is very close to my house, but the application deadline has passed! @[papa's scooperia](https://papasscooperia.io)
Comment: European Bioconductor Conference 2023 planning
by
teenage.damselfly.cqyy
• 0
Right, a European Bioconductor conference, eh? Gaining experience for future hosting gigs sounds like a plan. Visibility and influencing th…
Comment: HMP_2019_t2d data origin
by
pleiramallls
• 0
I wanted to ask where the raw data in the HMP_2019_t2d dataset comes from.
Comment: Updated Support Site Editor
by
vs
• 0
Thanks for posting this comment, I had the same issue and was able to solve it with the ASCII clue. I am a non-native speaker of English, a…
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
by
ATpoint
★ 4.9k
No, cells from the same donor are correlated due to the donor effect. There is literature on this you should read to get started. https:/…
Votes
Comment: Updated Support Site Editor
Updated Support Site Editor
Comment: Updated Support Site Editor
Comment: DESeq2 used with zinbwave weights - Differences on contrasts calculations
Comment: DESeq2 used with zinbwave weights - Differences on contrasts calculations
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