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pgsea
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Extract info from smc object
PGSEA
smc object
6.4 years ago
da.de
▴ 30
0
votes
1
reply
1.0k
views
PGSEA Steps Using Bioconductor
microarray
pgsea
updated 8.2 years ago by
Dan Tenenbaum
★ 8.2k • written 8.2 years ago by
livdiehard
• 0
0
votes
3
replies
1.8k
views
Running the GSEA algorithm
Microarray
GeneSetEnrichment
PGSEA
GSEABase
GSRI
SeqGSEA
Microarray
GeneSetEnrichment
GSRI
updated 10.1 years ago by
Steve Lianoglou
★ 13k • written 10.1 years ago by
Leif Väremo
▴ 70
0
votes
5
replies
3.4k
views
Running the GSEA algorithm
Infrastructure
PGSEA
GSEABase
SeqGSEA
Infrastructure
PGSEA
GSEABase
SeqGSEA
updated 10.1 years ago by
Julian Gehring
★ 1.3k • written 10.1 years ago by
enricoferrero
▴ 660
0
votes
0
replies
1.2k
views
[Rocky] - R code for PGSEA package to identify differentially expressed genes
GO
affy
limma
GLAD
PGSEA
GSEABase
GO
affy
limma
GLAD
PGSEA
GSEABase
12.3 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.1k
views
PGSEA and smcPlot
GO
hgu133plus2
PGSEA
GO
hgu133plus2
PGSEA
12.8 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.0k
views
PGSEA and smcPlot
GO
hgu133plus2
PGSEA
GO
hgu133plus2
PGSEA
12.8 years ago
Iain Gallagher
▴ 930
0
votes
0
replies
845
views
PGSEA and Ruuid
Ruuid
PGSEA
Ruuid
PGSEA
15.3 years ago
Daniel Klevebring
▴ 80
0
votes
3
replies
1.3k
views
Loading the PGSEA package.
PGSEA
PGSEA
updated 15.3 years ago by
Dykema, Karl
▴ 90 • written 15.3 years ago by
Marcus Gry
▴ 20
0
votes
3
replies
2.0k
views
a couple of questions on PGSEA package and GSEA
PGSEA
PGSEA
updated 15.7 years ago by
Furge, Kyle
▴ 210 • written 15.7 years ago by
Weiwei Shi
★ 1.2k
0
votes
2
replies
1.2k
views
ENTREZ identifiers for PGSEA
GO
lumi
PGSEA
GO
lumi
PGSEA
updated 15.9 years ago by
Dykema, Karl
▴ 90 • written 15.9 years ago by
Sebastien Gerega
▴ 370
0
votes
3
replies
1.3k
views
PGSEA question
probe
PGSEA
probe
PGSEA
updated 16.2 years ago by
Furge, Kyle
▴ 210 • written 16.2 years ago by
Johan Lindberg
▴ 70
12 results • Page
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Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
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Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
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Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
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Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
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