Bioconductor PlasFIA

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plasFIA

updated 2.9 years ago by James W. MacDonald 68k • written 2.9 years ago by batuhan.caglar1 • 0

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QuaternaryProd plasFIA gpuMagic

updated 3.0 years ago by shepherl 4.1k • written 3.0 years ago by مریم • 0

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plasFIA

updated 3.0 years ago by shepherl 4.1k • written 3.0 years ago by مریم • 0

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Comment: how many significant figures are there in DESeq2 output by Matthew McCormack ▴ 180

Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…

Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to by ATpoint ★ 4.7k

No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…

Answer: how many significant figures are there in DESeq2 output by ATpoint ★ 4.7k

I strongly recommend to not concern yourself with these sorts of marginal problems because you're entering a realm in which you're entirely…

Comment: Problem using locateVariants() from the VariantAnnotation package by Marco • 0

Ok, I think I found the problem. By looking at the `locateVariants()` source code, I was able to pinpoint that the problems is when trying …

Comment: Conumee for EPIC and EPICv2 copy number by Adam • 0

As described on the [github](https://github.com/hovestadtlab/conumee2) the way to do this is using array_type = c("EPIC", "EPICv2") This i…

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Popular Question to Matthew McCormack ▴ 180

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