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predict coding
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predictCoding errors with: sequence ^1$ not found
variantannotation
predict coding
locateVariants
granges
6.5 years ago
tony j
• 0
0
votes
2
replies
1.0k
views
predictCoding with multiple samples
predict coding
variantannotation
updated 8.7 years ago by
Valerie Obenchain
★ 6.8k • written 8.7 years ago by
luong.jeff
• 0
0
votes
1
reply
1.3k
views
trouble with predictCoding( function
snp
variantannotation
predict coding
8.8 years ago
vakul.mohanty
▴ 10
1
vote
10
replies
2.3k
views
predictCoding error DNAStringSet_translate
variantannotation
predict coding
updated 9.1 years ago by
Valerie Obenchain
★ 6.8k • written 9.1 years ago by
Miss Agnieszka Aleksandra Golicz
▴ 40
4
votes
3
replies
1.5k
views
how to save file on local disk after applying predictCoding() function?
vcf
predict coding
save file
VariantAnnotation
updated 9.6 years ago by
Thomas Sandmann
▴ 90 • written 9.6 years ago by
anastasiya-terskih
▴ 10
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Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
I'm new here, but its better now?
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
That did NOT really improve things...... Likely I wasn't clear enough, but with R-code I meant both the command you typed, as well as the o…
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
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