Bioconductor R3Cseq

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r3cseq bam trimmed

4.0 years ago ch_el ▴ 10

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985

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r3Cseq

updated 6.9 years ago by izzy.yichao.cai ▴ 10 • written 8.1 years ago by manduchi ▴ 10

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817

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4Cseq r3cseq

7.7 years ago tlgolan • 0

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934

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r3cseq 4c

8.8 years ago Theo ▴ 10

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806

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r3Cseq

9.0 years ago felix.klein ▴ 150

5 results • Page 1 of 1

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Comment: fgsea significant result by Chris • 0

Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…

Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0

Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…

Answer: Handling multiple differential expression comparisons by Michael Love 41k

It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…

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Answer: fgsea significant result

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