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rdgidb
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queryDGIdb lexical error for some genes
lexicalerror
rDGIdb
DGIdb
json
9 days ago
Dennis
• 0
0
votes
6
replies
428
views
rDGIdb package inconsistency with web interface
rDGIdb
4 months ago
christopherjamessteel1990
• 0
0
votes
0
replies
457
views
rDGIdb package: score of the results
rDGIdb
r
13 months ago
HELEN
• 0
0
votes
0
replies
506
views
Timeout error when querying DGIDB
rDGIdb
22 months ago
Jannah
• 0
0
votes
0
replies
444
views
DGIdb service not available
rDGIdb
2.2 years ago
DannyM
• 0
0
votes
0
replies
603
views
Is there currently something wrong with the rDGIdb API?
rDGIdb
3.4 years ago
mike-zx
• 0
0
votes
1
reply
1.0k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
Thomas Thurnherr
• 0
7 results • Page
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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Robert Castelo
★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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shepherl
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