Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
reads
•
reset
2
votes
3
replies
1.5k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 4.9 years ago by
Wei Shi
★ 3.6k • written 4.9 years ago by
Raito92
▴ 60
2
votes
5
replies
938
views
Software package for RNA-seq reads simulation?
rna-seq
reads
updated 4.9 years ago by
Gordon Smyth
50k • written 4.9 years ago by
Ramiro Magno
▴ 100
0
votes
1
reply
1.3k
views
DEXseq reads all in ambiguous_readpair_position and empty categories
dexseq
reads
6.9 years ago
514028929
• 0
0
votes
2
replies
953
views
DiffBind absence of reads
diffbind
reads
bamfiles
updated 7.1 years ago by
Rory Stark
★ 5.2k • written 7.1 years ago by
kbrnrc
• 0
0
votes
7
replies
1.8k
views
Speeding up or replacing Loops to process Bam Reads
genomicranges
reads
genomicfeatures
Bam
9.1 years ago
gen
▴ 30
2
votes
2
replies
3.1k
views
DESeq: filter out low count reads
deseq
filter
reads
9.3 years ago
ccheung
• 0
0
votes
1
reply
2.2k
views
Rename read-chromosome-names to refseq-chromosome-names.
reads
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
marcovth
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
Awards
• All
Scholar
to
Michael Love
41k
Popular Question
to
Malcolm Cook
★ 1.6k
Teacher
to
Gordon Smyth
50k
Popular Question
to
priyanka.m
• 0
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Locations
• All
WEHI, Melbourne, Australia,
4 minutes ago
France,
7 minutes ago
The city by the bay,
12 minutes ago
India,
1 hour ago
India,
2 hours ago
Traffic: 481 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6