Bioconductor Recount2

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TCGAbiolinks RECOUNT2 DESeq2

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by xiaofeiwang18266 ▴ 60

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R TCGA recount2 recount

updated 5.8 years ago by Leonardo Collado Torres ★ 1.1k • written 5.9 years ago by alex.v.nesta • 0

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recount recount2 RangedSummarizedExperiment

updated 6.4 years ago by Leonardo Collado Torres ★ 1.1k • written 7.2 years ago by k.vitting.seerup ▴ 120

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Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

Comment: Guitar R package requires update due to dependency GenomicFeatures by ferran.llobet.cabau ▴ 10

Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…

Comment: Ensembl plants at annotationHub? by Guido Hooiveld ★ 4.1k

Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…

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Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

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Popular Question to Lluís Revilla Sancho ▴ 760