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Group Leader (Faculty) positions at EMBL-EBI, Cambridge UK
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Wolfgang Huber
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Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
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Andy Lynch
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Job opening - Data Scientist II - Fred Hutchinson Cancer Research Center
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3.1 years ago
Fred Hutch (Recruiting)
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Flatiron Research Fellow, Structural and Molecular Biophysics
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simonsF.careers
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Bioinformatics Analyst I-II, Prostate Cancer Program - Fred Hutch (Seattle, WA)
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Fred Hutch (Recruiting)
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Bioinformatics Scientist at NEXUS Personalized Health Technologies in Zurich
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8.6 years ago
Daniel Stekhoven
▴ 10
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Comment: Improving performance of edgeR and limma while adjusting for multiple confounder
by
ATpoint
★ 4.8k
If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…
Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species
by
Mike Smith
★ 6.6k
Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
by
Gordon Smyth
52k
We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
Answer: Merging EPICV1 and V2 betas
by
James W. MacDonald
68k
It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…
Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species
by
Benjamin
▴ 20
I have received a response from Ensembl regarding the items I have listed above. I wanted to post it here and will continue to post update…
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Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
A: Is logFC a log2 fold change or some other base in scran::findMarkers
Comment: Error in retrieving clinical data
What is the cheapest day to fly on American Airlines? {Ask_Expert}
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