Showing : samples • reset
6
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Which rlog should I use for DESeq2 analysis
samples rlog DESeq2
updated 2.5 years ago by 41k • written 2.5 years ago by ▴ 50
0
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3
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600
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Student
samples sampleNumbers DESeq2
written 2.0 years ago by • 0
2
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1
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869
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edgeR normalisation which samples to include
edger normalization samples comparisons
updated 6.6 years ago by 50k • written 6.6 years ago by • 0
0
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1
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649
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Paired samples in DESeq2
R deseq2 Paired Samples
updated 5.2 years ago by 41k • written 5.2 years ago by • 0
4 results • Page 1 of 1
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Comment: Postdoctoral Position in Bioinformatics - Mainz, Germany by Jammie • 0
[Online kasiinod][1] pakuvad mängijatele võimalust nautida põnevat hasartmängukogemust otse oma arvuti või mobiilseadme kaudu. Need kasiino…
Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k
> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…
Comment: Differences in differential analysis methods for RNA-Seq by james.zhang20 • 0
Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…
Answer: Deseq2 and Normalization of RNA sequencing data by ATpoint ★ 4.1k
There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …
Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Votes
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
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