Bioconductor Seqlevels

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granges seqlevels feature request

updated 3.4 years ago by story.benjamin ▴ 20 • written 8.4 years ago by Charles Plessy ▴ 180

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1.9k

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txdb.hsapiens.ucsc.hg19.knowngene seqlevels bugs

updated 8.8 years ago by Hervé Pagès 16k • written 8.8 years ago by wcstcyx ▴ 30

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txdb threeutrsbytranscript seqlevelsstyle seqlevels

10.0 years ago Robert K. Bradley ▴ 40

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8.4k

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granges seqlevels

10.5 years ago Hermann Norpois ▴ 170

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2.2k

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variantannotation seqlevels error

updated 11.1 years ago by Valerie Obenchain ★ 6.8k • written 11.1 years ago by Asma rabe ▴ 290

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Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 4.9k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 4.9k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0

The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…

Answer: Gatins Set error by James W. MacDonald 68k

`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.

Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k

Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…

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