Bioconductor Seqlevels

Showing : seqlevels • reset

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2.0k

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granges seqlevels feature request

updated 16 months ago by story.benjamin ▴ 20 • written 6.4 years ago by Charles Plessy ▴ 180

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1.2k

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txdb.hsapiens.ucsc.hg19.knowngene seqlevels bugs

updated 6.8 years ago by Hervé Pagès 16k • written 6.8 years ago by wcstcyx ▴ 30

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1.1k

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txdb threeutrsbytranscript seqlevelsstyle seqlevels

8.0 years ago Robert K. Bradley ▴ 40

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7.2k

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granges seqlevels

8.4 years ago Hermann Norpois ▴ 170

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1.6k

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variantannotation seqlevels error

updated 9.0 years ago by Valerie Obenchain ★ 6.8k • written 9.0 years ago by Asma rabe ▴ 290

5 results • Page 1 of 1

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Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…

Comment: DMRcate design by James W. MacDonald 63k

That's what identical context means.

Votes

Answer: What MetaPhlAn3 database was used in cMD 3?

Comment: Speeding up of DelayedArray::write_block()

Answer: DelayedArray::read_sparse_block

Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available

Comment: Timely differentially expressed genes

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