Bioconductor Signer

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signeR mutationcountmatrix expandedvcf

3.5 years ago Nikita • 0

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723

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signeR getseq

updated 5.0 years ago by renan.valieris ▴ 10 • written 5.0 years ago by TRASA • 0

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918

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software error signeR

5.3 years ago Dan • 0

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signer install error

updated 5.4 years ago by shepherl 3.9k • written 5.4 years ago by taha.valizadeh • 0

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signeR

updated 7.3 years ago by renan.valieris ▴ 10 • written 7.3 years ago by Bogdan ▴ 670

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signeR

updated 7.4 years ago by renan.valieris ▴ 10 • written 7.4 years ago by Miguel Juliá • 0

6 results • Page 1 of 1

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Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.

Comment: deseq2 results by swbarnes2 ★ 1.4k

It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…

Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Dylan.Sheerin • 0

Thank you very much, Gordon. I'll give voomLmFit a go!

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Comment: deseq2 results

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie

Answer: Extremely small p-values using Limma for proteomic data

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