Biostar Install error

Showing : install error • reset

vote

replies

385

views

signer install error

updated 2.5 years ago by shepherl 2.7k • written 2.5 years ago by taha.valizadeh • 0

votes

replies

366

views

biostrings install error

2.6 years ago owenchapman1 • 0

vote

replies

1.1k

views

edger install error

updated 2.6 years ago by Aaron Lun ★ 26k • written 2.6 years ago by jenny.russ • 0

votes

replies

668

views

deseq2 rstudio install error

updated 2.7 years ago by Michael Love 33k • written 2.7 years ago by jyoung • 0

votes

replies

1.4k

views

bioclite phyloseq install error

2.7 years ago khp ▴ 30

votes

replies

343

views

install error

3.1 years ago xinfu.xia • 0

votes

461

views

install error package installation DAPAR prostar R version 3.4.4

3.2 years ago rita.reig • 0

7 results • Page 1 of 1

Recent ...

Replies

Comment: Determining number of genes in each module based on color in WGCNA package by schum266 • 0

For anyone who might be interested. I was able to figure this out. It's very easy.... just set numericLabels = FALSE. (*sigh*) ``` net = …

Comment: Research fellow in immunology by ATpoint ▴ 640

Try starting a new R session and then load the package again. If that fails then manually install ellipsis version 0.3.2 or greater. By the…

Answer: Creating the correct model to account for paired-samples (patient-effect) help n by Gordon Smyth 43k

In the limma User's Guide, Section 9.4.1 *Paired Samples* covers paired designs. In the edgeR User's Guide, it is Section 3.4.1.

Comment: How to convert .CEL file to .VCF file? by jesus • 0

Thank you! I'd already seen it, but the problem is that I'm using Windows and I think that code is only for Linux. Thanks anyway!

Comment: DESeq2 codes by Ram ▴ 60

DESeq2 is a piece of software that can be used to find statistically significant differential expression in RNAseq datasets. See: https://b…

Votes

Comment: What is the correct use of removeBatchEffect's design parameter

Answer: DESeq2 for allele-specific expression with contrasts between conditions

C: DESeq2 question about use of DESeqDataSetFromTximport() from RSEM data

Comment: Data input for aracne2regulon function in viper package

Comment: DESeq2: NA's in mcols(object)$betaConv

Awards • All