Bioconductor SubsetByOverlaps

Showing : subsetByOverlaps • reset

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InteractionSet subsetByOverlaps GenomicInteractions

2.6 years ago Laureano Tomás-Daza ▴ 10

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5.4k

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findOverlaps GPos GenomicRanges subsetByOverlaps

updated 4.1 years ago by James W. MacDonald 68k • written 4.1 years ago by Robert ▴ 10

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11k

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granges genomicranges iranges subsetByOverlaps

updated 4.0 years ago by b.simpson • 0 • written 10.4 years ago by vinod.acear ▴ 50

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2.8k

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genomicranges subsetbyoverlaps granges findoverlaps

8.4 years ago Assa Yeroslaviz ★ 1.5k

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2.3k

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granges findoverlaps subsetbyoverlaps

updated 10.2 years ago by Michael Lawrence ★ 11k • written 10.2 years ago by vinod.acear ▴ 50

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2.2k

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granges genomicranges findoverlaps subsetbyoverlaps

updated 10.3 years ago by Hervé Pagès 16k • written 10.3 years ago by vinod.acear ▴ 50

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Answer: Limma-voom sample weights and impact on DEG numbers by fawadsaafir • 0

<a href="https://deltaexecutoor.com/">delta apk</a> también conocido como Delta X, es una herramienta avanzada para ejecutar scripts perso…

Comment: Error message that there is no package called Biobase by DamionLedner99 • 0

thanks for sharing!!! https://cran.r-project.org/

Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

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Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2

Comment: Are transformed values from rlog /vst log2 normalized counts?

Answer: Are transformed values from rlog /vst log2 normalized counts?

A: DESeq2 normalization vs VST vs rlog

Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline

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