Bioconductor SubsetByOverlaps

Showing : subsetByOverlaps • reset

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921

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InteractionSet subsetByOverlaps GenomicInteractions

2.5 years ago Laureano Tomás-Daza ▴ 10

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5.2k

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findOverlaps GPos GenomicRanges subsetByOverlaps

updated 4.0 years ago by James W. MacDonald 68k • written 4.0 years ago by Robert ▴ 10

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11k

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granges genomicranges iranges subsetByOverlaps

updated 3.9 years ago by b.simpson • 0 • written 10.3 years ago by vinod.acear ▴ 50

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2.7k

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genomicranges subsetbyoverlaps granges findoverlaps

8.3 years ago Assa Yeroslaviz ★ 1.5k

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2.3k

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granges findoverlaps subsetbyoverlaps

updated 10.1 years ago by Michael Lawrence ★ 11k • written 10.1 years ago by vinod.acear ▴ 50

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2.2k

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granges genomicranges findoverlaps subsetbyoverlaps

updated 10.2 years ago by Hervé Pagès 16k • written 10.2 years ago by vinod.acear ▴ 50

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Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

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Answer: DESeq2 class error: superclass "ExpData" not defined in the environment of the o

Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

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