Showing : tandem repeats • reset
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Add TRF in mouse BSgenome
BSgenome.Mmusculus tandem repeats TRF
updated 2.6 years ago by 2.8k • written 2.7 years ago by ▴ 10
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Is there any package helps finding Tandem Repeats ?
r bioconductor Repeat tandem repeats
updated 6.1 years ago by 15k • written 6.1 years ago by ▴ 10
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Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way by Ming ▴ 350
Thx so much for the diagnosis and advice. Indeed, in my data, some genes have all 0 for all sampes of a contrast for both "Mut" and "WT" gr…
Comment: Best practice for quantifying sncRNA by Steve Lianoglou 13k
> It's my opinion that miRNA is a mirage intended to make MDs salivate and biostatisticians wail in misery, but what do I know? I'll tell …
Comment: Idea: Using DESeq2 to test a change in ratio of two genes by Michael Love 33k
Yes, it's true that we take the reference gene(s) as a noise free measurement of the reference variation with this approach, and control ag…
Answer: What lfcSE is dependent upon? by Michael Love 33k
> I tried separating out one comparison from all the system, running DESeq2 on it separately. This question is a FAQ in the vignette, tak…
Answer: P value and Adj. P value showing N/A by Michael Love 33k
This is explained in the DESeq2 vignette.
Votes
Comment: Idea: Using DESeq2 to test a change in ratio of two genes
Time Series Analysis
Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels
Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels
Answer: Time series DE gene analysis with edgeR where specific timepoints have NA levels
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