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Answer: DeSeq2 with 2 conditions and 3 time points
by
swbarnes2
▴
730
> do I need to somehow perform a normalization to baseline
If you want to compare two things, just compare two things. Adding in the v…
Answer: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
by
Aaron Lun
★
26k
Changes in the mapping proportions aren't surprising, the aligner has probably changed a fair bit in the last 6 years since the paper was p…
Comment: Warning in EnhancedVolcano plot
by
charles.feigin
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20
Sorry, one more quick reply. So, changing lengthConnectors and/or directionConnectors doesn't let me render any more connectors, but I foun…
Comment: Warning in EnhancedVolcano plot
by
charles.feigin
▴
20
Ok I understand. I'll play around with these. Thank you!
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