Bioconductor Tidyverse

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3.9k

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tidyverse R SingleCellExperiment SingleCellData

written 2.2 years ago by Sitapriya • 0

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1.7k

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edgeR R tidyverse tidybulk

3.2 years ago Amit Indap ▴ 10

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2.2k

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Rscript tidyr dataframe tidyverse offtopic

updated 3.5 years ago by Marcel Ramos 700 • written 3.5 years ago by Nikhil • 0

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bioconductor R tidyverse IlluminaHumanMethylationEPICanno.ilm10b4.hg19.

updated 7.5 years ago by James W. MacDonald 68k • written 7.5 years ago by jonellevillar • 0

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2.7k

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variantannotation tidyverse genomicfeatures

updated 8.4 years ago by Hervé Pagès 16k • written 8.4 years ago by yduan004 ▴ 20

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Comment: Jobs at Ensembl by frostybuddyy • 0

I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…

Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k