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transcriptr
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Problem installing packages including flowWorkspace
transcriptR
updated 2.9 years ago by
shepherl
3.9k • written 2.9 years ago by
Alice
▴ 10
0
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0
replies
947
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transcriptR predictStrand Error: subscript contains invalid names
transcriptR
predictStrand
4.5 years ago
jason.williams
• 0
1
vote
4
replies
1.3k
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transcriptR ChIP-seq RNA-seq bam Error in mergeNamedAtomicVectors
TranscriptR
RNA-seq
ChIP-seq
updated 4.5 years ago by
James W. MacDonald
65k • written 4.5 years ago by
jason.williams
• 0
0
votes
6
replies
839
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Cannot put file path in for bam file when attempting to construct a TDS in transcriptR
transcriptR
updated 4.6 years ago by
James W. MacDonald
65k • written 4.6 years ago by
jason.williams
• 0
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Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Comment: deseq2 results
by
sajadahmad41454
• 0
could you please tell me if the results are fine or not? ![pca summary][1] ![pca plot][2] [1]: /media/images/ee7d8693-bcbe-4a7a-a566-d3…
Answer: normalization using Deseq2
by
ATpoint
★ 4.1k
counts(dds, normalized=TRUE)
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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